Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00916 ATGGCTTTGTTTTCTCATTCACTTTTTCATTTTGCCTTATTAATATTCCTTATCTCCTTCGATTACAACAACCTTTTGGTTGGTGTATCATCAACCACTCTAAGCATTACCACAGACACAGAAGCATTGATCTCATTAAAGTCTCAATTAAGTAATAATGACACTTCAAATTCTCATCCATTATCCTCTTGGAGCCGGAACTCATCTCCTTGCAATTGGACTGGTGTCCTATGTGACAAGCATAACCAAAGAGTCATTGGCTTAGATCTTTCAGGCTTTGGACTCTCAGGTAACTTAAGTCCTTATATAGGTAACTTGTCCTCTCTTCAGTCCCTCCGATTGCAGGATAATCAGTTCACAGGAATCATTCCTAACCAAATCACCAATCTACATAATTTGAGAGTTCTAAATATGAGTTCTAACAGATTTGAAGGAATGACGCTTCCTTTGAATCTTACCAATTTAGATGAGCTTCAGATTCTTGATTTGTCCTCAAACAAGATTCTAAGCAGAATTCCTGAAGACTTCAGCAGCTTGAAAAAGCTACAGGTGTTGAAACTTGGAAGGAATAGCTTCTATGGTACAATTCCACAATCTCTAGGAAATATTTCTTctctaaaaaatataagtttcgGAACCAACTCTCTTAGTGGCTGGATTCCTAGTGAATTAGGTAAGTTACATAATTTAATTGAGCTTGATATTACTCTTAACAATCTTACTGGAACTGTTCCACCAGTAATATACAACTTGTCTTCCCTTGTTAACTTGGCCTTAGCTTCAAACTCCTTTTGGGGTGAGATACCTTATGATGTTGGTCATAAACTTCCTAAACTACTAGTTTTCAATTTCTGCTTCAATAAGTTCACAGGTAGAATTCCAGGGTCTTTGCATAATCTCACAAACATTAGGGTCATTCGTATGGCCTCTAACCGTTTGGAAGGAACAGTTCCACCCGGTTTAGGAAATCTTCCATTTCTTCACATGTATAATATTGGCTATAACAGGATAGTCACTTCAGGAGTCAATGGTTTGGACTTCATTACTTCATTGACAAACAGCACTCACTTGAACTTTCTAGCAATTGATGGAAATATGCTTGAAGGTGTGATTCCTGAAACCATTGGCAATCTCTCAAAGGAACTCTCAAACTTATACATGGGAGAGAATCGTTTCAATGGAAGTATACCATCTTCCATTGGTCGTCTTAGCGGCTTGAAGTTGTTAAACTTGAGCTACAATTCAATCATCGGCGAGGTTCCAAAGGAGTTAGGCCAATTAGAGGAACTACAAGAGCTATATCTTGATGGAAATAAGATATCAGGATCTATTCCAAACTCTCTTGGAAATCTTATAAAGTTAAACAAGattgatttgtcaaaaaatgaaCTTGTCAATAGAATACCAATCAGTTTTGGTAATTTTCAAAACCTGCTATACATGGACTTATCTAGCAACAAACTCAATGGAAGCATACCTGTGGAAATCCTCAACCTACAAACTTTGAGCAATGTTTTAAACTTATCAAAGAATTTGTTGAGTGGATCAATACCCGAAGTTGGGAAATTGCCTACCATTGCAACTATTGACTTTTCCAACAACCGATTGTATGGAAATATCCCAAGCTCAATCAGCAGTTGTTTGAGCTTGGAGAAATTGTTTTTGTCCAACAATCTGCTTTCAGGTTCCATTCCAAAAGCTCTTGGAGATGTGAGAGGCTTGGAAACTTTGGACTTGTCCTCCAACCTACTCTCAGGATCCATTCCTATTGAACTTCAAAATTTGCAAGTCCTAAACCTTTTAAACCTCTCTTATAATGATTTAGAAGGAGCCATTCCTAGTGGTGGAGTTTTCCAAAATCTCTCTGCTGTCCACTTAGAAGGCAATAAAAAACTATGCTTGCATTTTGCATGTGTGCCTCAAGTCCATAGAAGAACACATGTTAGATTTTATATCATCATAGCTGTTGTGTTAACATTGGTACTATGTCTCACAATTGGCTTGCTACTATACATGAAGTACAGAAAGGTTAAAGTCACAGCAACAACAGATTCTGGACAGCTAAAGCCGCAGGCTCCAATGATTTCTTATGATGAGCTTCGCTTGGCAACTGAGGAGTTCATCCAAGAAAATTTAATAGGAATTGGGAGTTTTGGATCAGTGTATAAAGGCTGTCTAAGTCGGGGAAATACTGTTGCAGTGAAAGTGATTGACACTCTAAGAACCGGTTCTTTAAAGAGTTTCTTTGCAGAGTGTGAGGCTATGAAGAATTCAAGGCATAGAAATCTGGTTAAGCTCATCACATCATGTTCTAGTGTTGACtttaaaaacaatgattttcTGGCTTTGGTGTATGAGTATTTAAGTAATGGGAGCTTGGAAGATTGGATTAaggggaggagaaatcatgcaAATGGAAATGGTTTGAACCTTATGGAGAGACTGAATATAGCTATAGATGTTGCTTGTGCATTAGATTACCTGCACAATGATAGTGAAACTCCTATTGTGCACTGTGATATAAAACCAAGCAATATTCTCCTGGATGAAGATATGACTGCAAAGGTGGGAGACTTTGGTTTGGCTAGGTTTCTGATTCAAAGTTCAACTGATAAAGTTTCCATCAGCTCCACTCATGTCCTTAGGGGTTCAATTGGTTACATACCTCCAGAGTATGGATGGGGAGAGAAACCTTCAGCAGCAGGAGATGTATATAGTTTTGGGATAGTGTTACTAGAGCTCTTCTCTGGGAAAAGTCCACAGGATGATTGCTTCACAGGAGGGCTGAGCATAACAAAATGGGTGCATTCAGCTCTCAAAAACAAGACTGTTCAAGTCATTGACCCTCAGCTGCTATCTCTCATTTTTCATGATGGTCCTGCTAGAGAAGACTCCAATCTACTAATCCATTGTGTGGATGCAATTATGGGAGTTGGCATGTCCTGCACTGCAGACAATCCAGATGACCGCATTGGCATTAGAGTTGCTGTTCGCCAACTAAAAGCTGCCAGGGACTCTCTTATGAAAAAATCTGATATTAGGACGAGTCCACTAAAAGCTACTATTTGA 3069 0.3783 MALFSHSLFHFALLIFLISFDYNNLLVGVSSTTLSITTDTEALISLKSQLSNNDTSNSHPLSSWSRNSSPCNWTGVLCDKHNQRVIGLDLSGFGLSGNLSPYIGNLSSLQSLRLQDNQFTGIIPNQITNLHNLRVLNMSSNRFEGMTLPLNLTNLDELQILDLSSNKILSRIPEDFSSLKKLQVLKLGRNSFYGTIPQSLGNISSLKNISFGTNSLSGWIPSELGKLHNLIELDITLNNLTGTVPPVIYNLSSLVNLALASNSFWGEIPYDVGHKLPKLLVFNFCFNKFTGRIPGSLHNLTNIRVIRMASNRLEGTVPPGLGNLPFLHMYNIGYNRIVTSGVNGLDFITSLTNSTHLNFLAIDGNMLEGVIPETIGNLSKELSNLYMGENRFNGSIPSSIGRLSGLKLLNLSYNSIIGEVPKELGQLEELQELYLDGNKISGSIPNSLGNLIKLNKIDLSKNELVNRIPISFGNFQNLLYMDLSSNKLNGSIPVEILNLQTLSNVLNLSKNLLSGSIPEVGKLPTIATIDFSNNRLYGNIPSSISSCLSLEKLFLSNNLLSGSIPKALGDVRGLETLDLSSNLLSGSIPIELQNLQVLNLLNLSYNDLEGAIPSGGVFQNLSAVHLEGNKKLCLHFACVPQVHRRTHVRFYIIIAVVLTLVLCLTIGLLLYMKYRKVKVTATTDSGQLKPQAPMISYDELRLATEEFIQENLIGIGSFGSVYKGCLSRGNTVAVKVIDTLRTGSLKSFFAECEAMKNSRHRNLVKLITSCSSVDFKNNDFLALVYEYLSNGSLEDWIKGRRNHANGNGLNLMERLNIAIDVACALDYLHNDSETPIVHCDIKPSNILLDEDMTAKVGDFGLARFLIQSSTDKVSISSTHVLRGSIGYIPPEYGWGEKPSAAGDVYSFGIVLLELFSGKSPQDDCFTGGLSITKWVHSALKNKTVQVIDPQLLSLIFHDGPAREDSNLLIHCVDAIMGVGMSCTADNPDDRIGIRVAVRQLKAARDSLMKKSDIRTSPLKATI 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00916 1022 Gene3D Phosphorylase Kinase; domain 1 687 787 - -
Tsu02g00916 1022 CDD STKc_IRAK 713 990 - -
Tsu02g00916 1022 Pfam Leucine rich repeat 381 440 IPR001611 GO:0005515
Tsu02g00916 1022 Pfam Leucine rich repeat 549 608 IPR001611 GO:0005515
Tsu02g00916 1022 Pfam Protein kinase domain 709 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00916 1022 SMART serkin_6 707 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00916 1022 ProSiteProfiles Protein kinase domain profile. 707 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00916 1022 SUPERFAMILY RNI-like 256 614 - -
Tsu02g00916 1022 Pfam Leucine Rich Repeat 158 179 IPR001611 GO:0005515
Tsu02g00916 1022 Gene3D Ribonuclease Inhibitor 243 343 IPR032675 -
Tsu02g00916 1022 Gene3D Ribonuclease Inhibitor 148 242 IPR032675 -
Tsu02g00916 1022 PANTHER OS04G0122200 PROTEIN 25 1007 - -
Tsu02g00916 1022 Pfam Leucine rich repeat N-terminal domain 38 79 IPR013210 -
Tsu02g00916 1022 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 25 1007 - -
Tsu02g00916 1022 Gene3D Ribonuclease Inhibitor 38 147 IPR032675 -
Tsu02g00916 1022 ProSitePatterns Protein kinases ATP-binding region signature. 713 735 IPR017441 GO:0005524
Tsu02g00916 1022 ProSiteProfiles Leucine-rich repeat profile. 573 596 IPR001611 GO:0005515
Tsu02g00916 1022 Gene3D Transferase(Phosphotransferase) domain 1 788 1018 - -
Tsu02g00916 1022 SUPERFAMILY L domain-like 39 337 - -
Tsu02g00916 1022 SUPERFAMILY Protein kinase-like (PK-like) 688 1000 IPR011009 -
Tsu02g00916 1022 ProSiteProfiles Leucine-rich repeat profile. 157 180 IPR001611 GO:0005515
Tsu02g00916 1022 SMART LRR_typ_2 475 499 IPR003591 -
Tsu02g00916 1022 SMART LRR_typ_2 403 426 IPR003591 -
Tsu02g00916 1022 SMART LRR_typ_2 130 154 IPR003591 -
Tsu02g00916 1022 SMART LRR_typ_2 427 451 IPR003591 -
Tsu02g00916 1022 SMART LRR_typ_2 571 594 IPR003591 -
Tsu02g00916 1022 SMART LRR_typ_2 179 203 IPR003591 -
Tsu02g00916 1022 SMART LRR_typ_2 155 178 IPR003591 -
Tsu02g00916 1022 SMART LRR_typ_2 106 129 IPR003591 -
Tsu02g00916 1022 SMART LRR_typ_2 300 324 IPR003591 -
Tsu02g00916 1022 SMART LRR_typ_2 227 251 IPR003591 -
Tsu02g00916 1022 SMART LRR_typ_2 595 620 IPR003591 -
Tsu02g00916 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Tsu02g00916 1022 Gene3D Ribonuclease Inhibitor 344 641 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00916 Tsu-Chr2 7652438 7656951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00916 38 1011 Receptor kinase-like Gene Family AT3G47570 41.064 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu02g00916 Pkinase 9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00916 - - gmx:100783512 1567.75