Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00915 ATGTACAAATTGATTCATAAACATCGTGCTTTGAACGATGACACAACAATTGCTGATGATATGTATGTTGGTGAGTGTCAAGATGCAAGTAAGTTCAATAAAGATTTGGTCCAAGGAAACCTCCTAATATGTAGTTATACAATGCGATTTGTTCTTGGTCTCTCCAGCATGAACATGGCCTTGGAAACAGCCATGAACCTTAGTGCTGCCGGTGTTGTTTTCCCCATGAATCCTTCTATATTACTAGAATACTACAATTCTTCGCTGGAAAAAGATGGTACTtcagaaaaaattataaaacttgGGGCTTTTGCTAGCATTAATGGCGGACTAACGGCGAGCTATAGTAATGTTGCCCCAAGTGTTATGTATTATTCTGCCAGAGGACCAGATCCAGAAGACAGTCTTCCTCATGAAGCTGACATTTTGAAACCGAATCTGGTAGCTCCTGGAAGTTTAATATGGGCTGCTTGGAGTTCTGTTGCCACTGATTCAGATGAATTTCTAGGTGAAAATTTTGCAATGATATCTGGCACAAGCATGGCTGCACCTCATATTGCTGGTCTTGCTGCACTAATCAAGCAAAAGTTTCCCAATTTCAGTCCTGCTGCCATTGGATCTTCACTTTCCACCACGGAATCTCTGAATGAAAACAGTGGGAAGCCAATAATGGCTCAGCGGACATATCCCTCCCCGGACCTAAACAAATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTAAATGTTACTGCAGCATTAAACCCGGGATTGATTTTCGATTCGAGTTATGATGATTACACATCTTTTCTATGTGGTATCAATGGTTCAGCCTCTGCAGTGCTGGACTACATTGGTCAGAATTGTTGGACTCATAACTCGACTGTATATGGCTCTGATCTAAACTTGCCCTCAATCACTATAGCAAGGTTGGACCAATCTAGAATAGTGCAGAGAACAGTACAAAACATTGCTGCAAATGAAACTTATAGCGTTGGTTGGAGTTCTCCGTATGGAGTATCAGTGAAAGTATCTCCAACTCGCTTCTCTATTGCCAACGGAGAGAGGCAAGTCTTATCTGTGATCTTCAATGCAACAAGCAACAGCTCTACTGCCAGCTTTGGAAGGATTGGATTGTTTGGTAATCAAGGTCACGTAGTCAATATTCCTGTGTCAGTCATCGTTAAAATATCACTATGA 1203 0.4115 MYKLIHKHRALNDDTTIADDMYVGECQDASKFNKDLVQGNLLICSYTMRFVLGLSSMNMALETAMNLSAAGVVFPMNPSILLEYYNSSLEKDGTSEKIIKLGAFASINGGLTASYSNVAPSVMYYSARGPDPEDSLPHEADILKPNLVAPGSLIWAAWSSVATDSDEFLGENFAMISGTSMAAPHIAGLAALIKQKFPNFSPAAIGSSLSTTESLNENSGKPIMAQRTYPSPDLNKSPATPFDMGSGFVNVTAALNPGLIFDSSYDDYTSFLCGINGSASAVLDYIGQNCWTHNSTVYGSDLNLPSITIARLDQSRIVQRTVQNIAANETYSVGWSSPYGVSVKVSPTRFSIANGERQVLSVIFNATSNSSTASFGRIGLFGNQGHVVNIPVSVIVKISL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00915 400 ProSiteProfiles Serine proteases, subtilase domain profile. 1 255 - -
Tsu02g00915 400 Pfam Subtilase family 105 213 IPR000209 GO:0006508|GO:0008236
Tsu02g00915 400 Pfam Fibronectin type-III domain 301 394 IPR041469 -
Tsu02g00915 400 Gene3D Peptidase S8/S53 domain 116 268 IPR036852 GO:0004252|GO:0006508
Tsu02g00915 400 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 80 398 - -
Tsu02g00915 400 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 80 IPR045051 -
Tsu02g00915 400 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 80 398 IPR045051 -
Tsu02g00915 400 SUPERFAMILY Subtilisin-like 122 298 IPR036852 GO:0004252|GO:0006508
Tsu02g00915 400 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 1 80 - -
Tsu02g00915 400 Gene3D - 18 114 - -
Tsu02g00915 400 Gene3D - 272 396 - -
Tsu02g00915 400 ProSitePatterns Serine proteases, subtilase family, serine active site. 178 188 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00915 Tsu-Chr2 7651044 7652907 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00915 2 399 Subtilisin-like Serine Gene Family AT4G20430 59.434 1.61e-176 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00915 - - gmx:121174902 629.017