Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00913 ATGCCAGTATCAACCAATGCAAATGGAAATGGTTTGAACCTTATGGAGAGAGTGAATATAGCTATAGATTGTGCATTAGATTACCTGCACAATGATAGTGAAACTCCTATTGCGCACTGTGATTTAAAACCAAGCAACATTCTCCTAGATGAAGATATGACCGCAAAGGTTGGCGACTTTGGTTTGGCTAGGTTTCTGATTCAAAGTTCAACCGATCAAGTTTCCATCAGCTCCACTCATGTCCTTAGGGGTTCAATTGGTTACATACCTAGTACCTTGACAAACAAACTTCTTCTTTTCAAGAAGTTTTTAACTCATTCAAAGTATGGTTGGGGAGAGAAACCTTCAACTGAGCTCTTCTCTGGGAAAAGTCCACAAGATGATTGCTTCACAGGAGGCCTAAGCATAACAAAATGGGTGCAATCAGCATTCGGAAACAAGACTGTACAAGTCATTGACCCTCAGCAGCTATCCTTAATTTTCCATGATGATTCTGGTAGAGACTCCAATCTACAGCGTCATTGTGTGGATGCATTATGGGAGTTGGCATGTCCTGCGCTGCAGACAATCCAGTTGATCGCATTGGCGTTAGAGTTGATACATAGTATACCATTTTAA 618 0.411 MPVSTNANGNGLNLMERVNIAIDCALDYLHNDSETPIAHCDLKPSNILLDEDMTAKVGDFGLARFLIQSSTDQVSISSTHVLRGSIGYIPSTLTNKLLLFKKFLTHSKYGWGEKPSTELFSGKSPQDDCFTGGLSITKWVQSAFGNKTVQVIDPQQLSLIFHDDSGRDSNLQRHCVDALWELACPALQTIQLIALALELIHSIPF 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00913 205 Gene3D Transferase(Phosphotransferase) domain 1 4 108 - -
Tsu02g00913 205 PANTHER OS04G0122200 PROTEIN 7 183 - -
Tsu02g00913 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 37 49 IPR008271 GO:0004672|GO:0006468
Tsu02g00913 205 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00913 205 SUPERFAMILY Protein kinase-like (PK-like) 11 90 IPR011009 -
Tsu02g00913 205 Pfam Protein kinase domain 22 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00913 205 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 7 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00913 Tsu-Chr2 7648657 7649408 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00913 12 153 Receptor kinase-like Gene Family AT3G47570 39.873 8.55e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu02g00913 Pkinase 4.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00913 - - gmx:100783512 242.276