Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00911 ATGCAGACCAAAACCAAAGAAGCAAACATGGCTTTGTTTTCTCATTcacattttcatattttttccttattaaTGATCCTTATTCTCAACTTTGATTTCAACAACCATTTGTTTGTTGTATCATCATCAACCACTCTAAGCATCACCACAGACAAAGAAGCCTTGAACTCATTAAAATCTCAATTAAGTAATAATGAAACCTCTAGTTCTCACCCATTATCCTCTTGGAgccataattcatctccttgcAATTGGACTGGTGTCCTATGTGACAAGCATAACCAAAGAGTGACTGGCCTCGACCTTTCAGGCTTTGGATTATCAGGTAACTTAAGTCCTTATATAGGTAACATGTCCTCTCTTCAGTCCCTCCAATTGCAGGATAACCAGATCACAGGATTCATTCCTAACCAAATTACCAAACTATATAGTTTGAGAGTTCTAAATATGAGCTCTAACAGATTTGAAGGAGTACTTCCTTCAAACCTTACCAACTTAAATGAGCTCCAGGTTCTTGATTTGTCCTCGAACAAGATTGTAAGCAGAATTCCCGAAGACATCAGCAGCTTGAAAAAGCTGCAGACCTTGAAACTTGGAAGGAATAGCCTCTATGGTACAATTCCAGCAACTCTAGGAAATATTTCttctttgaaaaatataagttttggCACCAACTTTCTACGTGGTTGGATTCCAATTGACTTAGGTAGGCTACATAATTTAATTGAGCTTGATCTCACTCTTAACAATCTTACTGGGACTGTTCCATCTGTTGTATACAACTTGTCTTCCCTTGTTAACTTGGCCTTAGCTGCAAACTCCTTTTGGGGTGAGATACCTTATGATGTTGGTCATAAACTTCCAAAACTACTAGTTTTCAATTTCTGCTTCAATAAGTTCACAGGTAGAATTCCAGGGTCTTTGCACAACCTCACAAACATTAGGGTCATTCGTATGGCCTATAACCGTTTGGAAGGAACAGTTCCACCTGGTTTAGGAAACCTTCCATTTCTTCAAATGTATAATATTGGCCATAACAGGATAGTTACATCAGGAGTCAATGGTTTGGACTTCATTACTTCATTGACAAACAGCACTCACTTGAAATTTCTAGCAATTGATGGAAATATCCTTGAAGGTATGATTCCTGAAACCATTGGCAATCTCTCAAAGGAACTCTCAAACTTATACATGGGAGGGAATAGTTTCAATGGAAGTATACCATCTTCCATTGGTCGTCTTAGCGGCTTGAAGTTGTTAAACTTGAGTCGCAATTCAATCAGTGGTGAGGTTCCAAAGGAGTTAGGCCAGTTAGAGGAACTACAAGAGCTATATCTTGATGGAAATAAGATATCAGGATCTATTCCATACTCTCTTGGTAATCTACTAAAGTTAAACAAGATGGATTTGTCAAGAAATGAACTTGTAAGTAAAATACCAATCAGTTTTGGTAATTTGCAAAACCTGATTTACATGGACTTATCTAGCAACAAACTCAATGGAAGCATACCTGTGGAAATCCTCAACCTACCAACTTTGAGCAACGTTTTAAACTTATCAAAGAATTTTTTGAGTGGACCGATACCTCAAGTTGGGAAATTGCCTACCATTGCAACTATTGACTTTTCCAACAACCAACTGTCTGGAAACATCCCAAGCTCATTCAGCAGTTGTTTGAGCTTGGAGAAATTGTTTTTGTCAAACAATATGCTTTCAGGTTCCATTCCAAAAGCTCTTGGAGATGTGAGAGGCTTGGAAACTTTGGACTTGTCCTCCAACCTACTCTCAGGATCCATTCCTATTGAACTTCAAAATTTGCATGTCCTAAACCTTTTAAACCTCTCTTATAATGATTTAGAAGGAGCCATTCCTAGTGGTGGAGTTTTCCAAAATCTCTCTGATGTCCACTTAGAAGGCAATAAAAAACTATTCTTGCATGTTGCATGTGTGCCTCAAGTCCATAGAAGAACACATATCAGATTCATCACAGCTGTTGTTTTAACATTGGTACTATGTCTAACAATTGGCCTGCTACTATATATGAAGTATACAATGGTTAAGGTAACAGCAGCAACAGCGTCTGGACAGCTAAAGCCACAGGCTCTAATGATCTCTTATGACGAGCTTCGCTTGGCAACTGAGGAGTTCAGCCAAGAAAATTTAATAGGAATTGGGAGTTTTGGATCAGTGTATAAAGGCTGTCTAAGTCAGGGAAATACTGTTGCAGTGAAAGTGATTGACACTCTAAGAACAGGTTCTTTAAAGAGTTTCTTTGCAGAGTGTGAGGCTATGAAGAATTCAAGGCATAGAAATCTGGTTAAGCTCATCACATCATGTTCTAGTGTTGACtttaaaaacaatgattttcTGGCTTTGGTGTATGAGTATTTAAGTAATGGGAGCTTGGAAGATTGGATTAaggggaggagaaatcatgcaAATGGAAATGGTTTGAACCTTATGGAGAGACTGAATATAGCTATAGATGTTGCTTGTGCATTAGATTACCTGCACAATGATAGTGAAACTCCTATTGTGCACTGTGATATAAAACCAAGCAATATTCTCCTGGATGAAGATATGACTGCAAAGGTTGGAGACTTTGGTTTGGCTAGGTTTCTGATTCAAAGTTCAACTGATAAAATTTCCATCAGCTCCACTCATGTCCTTAGGGGTTCAATTGGTTACATACCTCCAGAGTATGGATGGGGAGAGAAACCTTCAGCAGCAGGAGATGTATATAGTTTTGGGATAGTGTTACTAGAGCTCTTCTCTGGGAAAAGTCCACAGGATGATTGCTTCACAGGAGGGCTGAGCATAACAAAATGGGTGCATTCAGCTCTCAAAAACAAGACTGTTCAAGTCATTGACCCTCAGCTGCTATCTCTCATTTTTCATGATGGTCCTAGAGAAGACTCCAATATACTAATCCATTGTGTGGATGCAATTATGGGAGTTGGCATGTCCTGCACTGCCGACAATCCAGATGACCGCATTGGCATTAGAGTTGCTGTTCGCCAACTAAAAGCTGCCAGGgattctcttataaaaaaatctgaTATTAGGACGAGTCCACTAAGAGCTACTATTTGA 3093 0.3763 MQTKTKEANMALFSHSHFHIFSLLMILILNFDFNNHLFVVSSSTTLSITTDKEALNSLKSQLSNNETSSSHPLSSWSHNSSPCNWTGVLCDKHNQRVTGLDLSGFGLSGNLSPYIGNMSSLQSLQLQDNQITGFIPNQITKLYSLRVLNMSSNRFEGVLPSNLTNLNELQVLDLSSNKIVSRIPEDISSLKKLQTLKLGRNSLYGTIPATLGNISSLKNISFGTNFLRGWIPIDLGRLHNLIELDLTLNNLTGTVPSVVYNLSSLVNLALAANSFWGEIPYDVGHKLPKLLVFNFCFNKFTGRIPGSLHNLTNIRVIRMAYNRLEGTVPPGLGNLPFLQMYNIGHNRIVTSGVNGLDFITSLTNSTHLKFLAIDGNILEGMIPETIGNLSKELSNLYMGGNSFNGSIPSSIGRLSGLKLLNLSRNSISGEVPKELGQLEELQELYLDGNKISGSIPYSLGNLLKLNKMDLSRNELVSKIPISFGNLQNLIYMDLSSNKLNGSIPVEILNLPTLSNVLNLSKNFLSGPIPQVGKLPTIATIDFSNNQLSGNIPSSFSSCLSLEKLFLSNNMLSGSIPKALGDVRGLETLDLSSNLLSGSIPIELQNLHVLNLLNLSYNDLEGAIPSGGVFQNLSDVHLEGNKKLFLHVACVPQVHRRTHIRFITAVVLTLVLCLTIGLLLYMKYTMVKVTAATASGQLKPQALMISYDELRLATEEFSQENLIGIGSFGSVYKGCLSQGNTVAVKVIDTLRTGSLKSFFAECEAMKNSRHRNLVKLITSCSSVDFKNNDFLALVYEYLSNGSLEDWIKGRRNHANGNGLNLMERLNIAIDVACALDYLHNDSETPIVHCDIKPSNILLDEDMTAKVGDFGLARFLIQSSTDKISISSTHVLRGSIGYIPPEYGWGEKPSAAGDVYSFGIVLLELFSGKSPQDDCFTGGLSITKWVHSALKNKTVQVIDPQLLSLIFHDGPREDSNILIHCVDAIMGVGMSCTADNPDDRIGIRVAVRQLKAARDSLIKKSDIRTSPLRATI 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00911 1030 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 37 1015 - -
Tsu02g00911 1030 Gene3D Ribonuclease Inhibitor 111 354 IPR032675 -
Tsu02g00911 1030 Gene3D Ribonuclease Inhibitor 45 110 IPR032675 -
Tsu02g00911 1030 Gene3D Phosphorylase Kinase; domain 1 696 796 - -
Tsu02g00911 1030 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515
Tsu02g00911 1030 Pfam Leucine rich repeat 560 619 IPR001611 GO:0005515
Tsu02g00911 1030 Pfam Leucine rich repeat 392 451 IPR001611 GO:0005515
Tsu02g00911 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Tsu02g00911 1030 Gene3D Transferase(Phosphotransferase) domain 1 797 1024 - -
Tsu02g00911 1030 SUPERFAMILY Protein kinase-like (PK-like) 699 1008 IPR011009 -
Tsu02g00911 1030 Pfam Leucine rich repeat N-terminal domain 50 91 IPR013210 -
Tsu02g00911 1030 Gene3D Ribonuclease Inhibitor 355 653 IPR032675 -
Tsu02g00911 1030 Pfam Protein kinase domain 717 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00911 1030 SMART LRR_typ_2 582 605 IPR003591 -
Tsu02g00911 1030 SMART LRR_typ_2 606 631 IPR003591 -
Tsu02g00911 1030 SMART LRR_typ_2 118 141 IPR003591 -
Tsu02g00911 1030 SMART LRR_typ_2 142 165 IPR003591 -
Tsu02g00911 1030 SMART LRR_typ_2 238 262 IPR003591 -
Tsu02g00911 1030 SMART LRR_typ_2 166 190 IPR003591 -
Tsu02g00911 1030 SMART LRR_typ_2 438 462 IPR003591 -
Tsu02g00911 1030 SMART LRR_typ_2 486 510 IPR003591 -
Tsu02g00911 1030 SMART LRR_typ_2 311 335 IPR003591 -
Tsu02g00911 1030 SMART LRR_typ_2 414 437 IPR003591 -
Tsu02g00911 1030 PANTHER OS04G0122200 PROTEIN 37 1015 - -
Tsu02g00911 1030 ProSitePatterns Protein kinases ATP-binding region signature. 722 744 IPR017441 GO:0005524
Tsu02g00911 1030 SUPERFAMILY L domain-like 50 349 - -
Tsu02g00911 1030 SUPERFAMILY RNI-like 243 631 - -
Tsu02g00911 1030 ProSiteProfiles Leucine-rich repeat profile. 168 190 IPR001611 GO:0005515
Tsu02g00911 1030 CDD STKc_IRAK 722 998 - -
Tsu02g00911 1030 SMART serkin_6 716 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00911 1030 ProSiteProfiles Protein kinase domain profile. 716 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00911 Tsu-Chr2 7627926 7632794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00911 28 329 Receptor kinase-like Gene Family AT3G47570 29.254 6.19e-26 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu02g00911 Pkinase 5.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00911 - - gmx:100783512 1538.47