Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00900 ATGATAGAAACTGGTGCACGTGATTCTGAGCTAAGTTTAGACACTGTTAATTCAATGAGCAGTGAAAGTATTTGCAGTACCAGTTTCAGTCGTCTTTCATTCGACCTACTTCCTCCTTCTCCGGAAACTCTCTCCATCAAGCCTCACCGTTCTTCCGATTTCGCCTACTCCGCAATCCGTTCCGCCACATTCCGTCGTAAATCCGCTCTTACTTTCCGCGACTTCCATCTCCTCCGCCGTATCGGCGCCGGCGACATCGGAACTGTTTACCTCTGCCGCCTCAGAAgcacagaagaagaagaagaagacgcGTGTTGCTTGTACGCGATGAAGGTTGTTGATAAAGACGTCGTCGCGTTGAAGAAGAAATCACAGAGAGCTGAAATGGAGAGAAAGATTCTGAAAATGCTTGATCATCCTTTTCTTCCTACACTCTACGCTGAGTTTGAAGCTTCTCATTTCTCTTGCATTGTTATGGAGTTTTGTTCCGGTGGTGACTTGCATTCCCTACGCCACAAACACCCTCATAACCGTCTTCCTCTTCCTTCCGCTAGATTTTATGCGGCTGAGGTATTGGTGGCTATGGAGTATCTTCACATGTTAGGAATCATTTACAGAGATCTAAAGCCTGAGAATGTTTTAGTTAGATCTGACGGTCATATCATGCTTTCAGATTTCGATCTATCACTTTGTTCTAATGCAATCCCAGCCGTTGAATCATCAGACATTTTACAAGATACCGCGTTTCCATCAACATTACCCTACACTCGCTCCCGTTCTTTTCCTACTCCATTTACTTGCTTTTCAAACCGGTTGTTTAAGTCACGTAAGATTCAAACCATTCATCCGAACCGGCTTTTTGTTGCTGAACCGGTTTCTGCTCGGTCTTGTTCTTTTGTTGGAACACATGAATATGTCTCACCGGAAGTTGCCGCCGGAAACTCACACGGAAACGCCGTAGATTGGTGGTCGTTTGGGATATTTATCTATGAGCTTATATATGGGTATACACCGTTTGCGGCTCCATCGAATAAAGCTACTCTGCGTAACATCTTAAAAAAACCCTTAACCTTTCCCACACCCACTTCCTCAAGCACGCTTGAATTCCACGCGCGTGATTTAATATCCGGGTTGCTTAACAAAGATCCAGCTCAACGTCTCGGGTCAAAACGCGGCGCGGCTGACGTCAAGAAGCATCCTTTTTTCAAAGGGATTAATTTGGCGCTGATTCGTATGATGACGCCGCCTGAAGTTCCTGGCTCAAGAAGACCTAAAACGACGCCGTTGAATAGTAGACAGCAACAAACGGCGTCgtttgatattttcttttga 1332 0.4414 MIETGARDSELSLDTVNSMSSESICSTSFSRLSFDLLPPSPETLSIKPHRSSDFAYSAIRSATFRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRSTEEEEEDACCLYAMKVVDKDVVALKKKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKHPHNRLPLPSARFYAAEVLVAMEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESSDILQDTAFPSTLPYTRSRSFPTPFTCFSNRLFKSRKIQTIHPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGNSHGNAVDWWSFGIFIYELIYGYTPFAAPSNKATLRNILKKPLTFPTPTSSSTLEFHARDLISGLLNKDPAQRLGSKRGAADVKKHPFFKGINLALIRMMTPPEVPGSRRPKTTPLNSRQQQTASFDIFF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00900 443 MobiDBLite consensus disorder prediction 416 443 - -
Tsu02g00900 443 PANTHER FLIPPASE KINASE 1-RELATED 1 442 - -
Tsu02g00900 443 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 442 - -
Tsu02g00900 443 CDD STKc_phototropin_like 73 419 - -
Tsu02g00900 443 Gene3D Transferase(Phosphotransferase) domain 1 295 420 - -
Tsu02g00900 443 Gene3D Phosphorylase Kinase; domain 1 73 161 - -
Tsu02g00900 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Tsu02g00900 443 ProSiteProfiles Protein kinase domain profile. 75 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00900 443 MobiDBLite consensus disorder prediction 424 443 - -
Tsu02g00900 443 Gene3D Transferase(Phosphotransferase) domain 1 162 230 - -
Tsu02g00900 443 SUPERFAMILY Protein kinase-like (PK-like) 57 420 IPR011009 -
Tsu02g00900 443 Pfam Protein kinase domain 75 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00900 443 Pfam Protein kinase domain 296 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00900 443 SMART serkin_6 75 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00900 Tsu-Chr2 7528959 7530380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00900 8 442 AGC Kinase Gene Family AT2G34650 65.625 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu02g00900 Pkinase 4.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00900 - - vun:114177159 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00900 02 7528959 7530380 Tsu02g00900 02 7528959 7530380 ECH