Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00876 ATGTCGAAACCCTGGGGCAACATCGGAGCTTGGGCCGCCGATTCAGAGGCCGCCGAAGCCGAAGAACGTGAAGCCGCGGCTATACAAGCTTCCGCCGGCTCGGATAACTTCCCGAGTCTGAAAGAAGCCGTTACTGCTAAACcgaagaagaataagaagatgTCGCTTTCTGAGTTCGCACGTGGCGGTTACTCTTCCGGTGGTGGTGCCGCAGATTATCCTAGATTGACACCGGATGAGATGCTTCGGCTTCCTACCGGTCCTAAAGAGCGTTCTGCTGAGGAAATGCAGTTTAACCGTCTCGGTGGTGGTTTTTCCAATTTTGACCGCGGTGGTCGTGGAAGGGATCGTGATGGTGGTTCTGGAGATGCTAATTGGGGTGCTGGAAGAAGATCTTATGGTGGATTTGATGATGAACGTAGGGCTCCGAATTCTAGGGTTTCGGAATTTGATCAGCCTTCGAGGGCTGATGAGGTGGATAATTGGGCGTCGGTGAAGAAGACACTTCCTTCGTTTGATTCCGGTAGGCAGAATCGATATGggggtggtggtggtggcggtGGCGGTGGTGGTTTTGGTGGTGAATCTAAGGCTGATGGAGTGGACAATTGGGCGGTTGGTAAGAAACCTTTACCTGTTAGATCTTCTGGTTATGGTTATCGTGATTCTGGAATGGAACCAGATCGGTGGTCTAGGGGTTCTGCTGTTGAACCAGATCGTTGGTCTAGAGGTGCACCTCGAGAAACGGAGCAGCAGCAGCGACCGAGGTTGGTTTTGGATCCAAGGAAAGGTGATGGTTCTGTGAATGAAGCTGCGGTGGTGAAGTCAAATAAGCCGAATCCATTTGGTGCGGCGAGGCCTAGGGAGGAAGTGTTAGCTGAGAAAGGATATGATTGGAAGAAGCTGGATTCTGAGATTGATGCGAAAAATAGGCCTACAAGTTCACATTCTAGCAGGCCTTCAAGTGCTCATTCCAATCGCTCTGAGGGTCCAGATGGTGCTGTGAAACCGAGGCCAAAGGTGAATCCCTTTGGGGATGCCAAACCCAGGGAGGTTTTGCTTAGTGAGCGTGGCAAGGATTGGCGTAAGATTGATCTGGAATTGGAGCATCGTGCTGTTGATAGGCCTGAGACTGTGgaggaaaaattattaaaagaagaaattgataatttgaagaaGGAACTTGAGAAGGAGTCTacaataaattcaaataaggaATCTGCGGATGATGCTGGTGTAGACCAAACTGGTACACGTGCAATCCTACAAGAGAAAGAAAGGGAGCTGGAACTTCTTATCCGTGATTTGGATGATAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGTTCCTCAGCAGGAAAGACTGCTGGTTTTAATGATAGGCCACCGTCTCGTTCTGGCTCATTTGAGGATTCTAGAAGTGTGGATTTTACGGACCGACCTCGATCCCGTGGCACAGGAGATATGTCGACGCGTCCTACTGATGACAGAAGACAATTTCAAGGTAGCAAGGAAAGGGGGTGGTTTTCGAACAGCAGAGACATGAATAGGAATTGGAGCAACAATCATTGA 1578 0.4696 MSKPWGNIGAWAADSEAAEAEEREAAAIQASAGSDNFPSLKEAVTAKPKKNKKMSLSEFARGGYSSGGGAADYPRLTPDEMLRLPTGPKERSAEEMQFNRLGGGFSNFDRGGRGRDRDGGSGDANWGAGRRSYGGFDDERRAPNSRVSEFDQPSRADEVDNWASVKKTLPSFDSGRQNRYGGGGGGGGGGGFGGESKADGVDNWAVGKKPLPVRSSGYGYRDSGMEPDRWSRGSAVEPDRWSRGAPRETEQQQRPRLVLDPRKGDGSVNEAAVVKSNKPNPFGAARPREEVLAEKGYDWKKLDSEIDAKNRPTSSHSSRPSSAHSNRSEGPDGAVKPRPKVNPFGDAKPREVLLSERGKDWRKIDLELEHRAVDRPETVEEKLLKEEIDNLKKELEKESTINSNKESADDAGVDQTGTRAILQEKERELELLIRDLDDKVRFGQKAVERPGSSAGKTAGFNDRPPSRSGSFEDSRSVDFTDRPRSRGTGDMSTRPTDDRRQFQGSKERGWFSNSRDMNRNWSNNH 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00876 525 Coils Coil 419 439 - -
Tsu02g00876 525 MobiDBLite consensus disorder prediction 395 419 - -
Tsu02g00876 525 MobiDBLite consensus disorder prediction 225 263 - -
Tsu02g00876 525 MobiDBLite consensus disorder prediction 474 505 - -
Tsu02g00876 525 MobiDBLite consensus disorder prediction 444 525 - -
Tsu02g00876 525 MobiDBLite consensus disorder prediction 133 162 - -
Tsu02g00876 525 MobiDBLite consensus disorder prediction 506 525 - -
Tsu02g00876 525 Pfam Plant specific eukaryotic initiation factor 4B 1 509 IPR010433 GO:0003743
Tsu02g00876 525 MobiDBLite consensus disorder prediction 1 353 - -
Tsu02g00876 525 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 522 - -
Tsu02g00876 525 Coils Coil 381 408 - -
Tsu02g00876 525 MobiDBLite consensus disorder prediction 313 328 - -
Tsu02g00876 525 MobiDBLite consensus disorder prediction 288 312 - -
Tsu02g00876 525 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 522 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00876 Tsu-Chr2 7375741 7382134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00876 1 521 Eukaryotic Initiation Factors Gene Family AT3G26400 53.036 1.07e-150 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00876 - - gmx:100784238 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00876 02 7375741 7382134 Tsu02g00876 02 7375741 7382134 ECH