Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00872 ATGTATATTGCTAAAAcacaattttataaatatcGGTTGGTGTGCATTAATATTCTccaatatatacacacacactttaCTCAAAAAAAGTATATAGGAGTACTTGTGAGTAGAgaattaattagtattttttttcttcttttcagaTATGGGAGAAATGGTATCTACAAGACTCACTTATTTGGAAATCCAAGTGTCATAATTTGTGATCCTGAGATGTGTAGACGAGTGCTCTTAGATGATGTAAACTTTATATTTGGCTATCCAAAATCAATCAAAGAGTTGACGAAATGTAGACCTATGATTGATGTCTCGAGTGCAAATCATAGGCATTTTCGACGCCTAATTACTGCTCCCATTGTTGGTCACAAGGCACTAGAAATGTACCTAGAACGTATTGAGGATATTGTCATTAATTCCTTAGAAGAATTGTCAAGCATGAATCACCCCGTTGAACTCTTGAAAGAGATGAGGAAGGTTTCATTTAAAGCCATTATCCATGTTTTCATGGGCTCTTCTAATGAgaacattattaaaaacattGGAAGTTCATTTAGTGATTTATCATTTGGCATGTACTCTCTCCCCATCAATGCACCTGGTTTTACTTACCACAAAGCATTCAAGGCACGCAAGAAGATAGCTAAAACATTTCAACCTGTGTTGGATGAAAGGAggttgatgataaaaaatggaCAAAATGTGGGAGAGAAGAGAGATCTATTGGATACTCTCTTGGAAGTCAAAGATGAGAATGGTAACAAATTGGAGGATGAAGATATTAGTGACTTTTTGATAGGGCTATTATTTGCAGGACATGAAAGTACAGCAACCGGACTAATGTGGTCAATTGCACATCTTACACAACATCCACATTTCCTTCAAAAAGCTaagGAAGAGCAAGAAGAAATCTTGAAAAAAAGACCAGACTCCCAAAAACAATTGAGTCTTGATGAAATCAAGCAAATGACCTATCTTTCTAATGTAATCAATGAAATGTTGCGATATGCCAATAttgcattttcaatttttagagAGGCAACATCTGATGTTAACATCAAAGGTTATCTCATACCAAAAGGATGGAGAGTGCTAATATGGGCAAGAGCTATTCATATGAATCCTGAATATTATCCAAATCCTGAAGAATTTAATCCTTCTAGATGGAATGAATACACTACCAAGGCAGGAACTTTCCTTCCTTTTGGAGCAGGAAGTAGGCTTTGCCCCGGAGCCGACTTAACAAAACTAGAAATGACTGTATTTCTTCACTATTTTCTCCTTAATTACAGGTTGGAGCGAATAAATCCAGAATGCCCTGTTACCACCTTGCCATGTAGGCCTACTGATTATTGTCTGGCTAAGGTTATAAAGGTCTCACAGCTTAGCTAA 1392 0.3391 MYIAKTQFYKYRLVCINILQYIHTHFTQKKYIGVLVSRELISIFFLLFRYGRNGIYKTHLFGNPSVIICDPEMCRRVLLDDVNFIFGYPKSIKELTKCRPMIDVSSANHRHFRRLITAPIVGHKALEMYLERIEDIVINSLEELSSMNHPVELLKEMRKVSFKAIIHVFMGSSNENIIKNIGSSFSDLSFGMYSLPINAPGFTYHKAFKARKKIAKTFQPVLDERRLMIKNGQNVGEKRDLLDTLLEVKDENGNKLEDEDISDFLIGLLFAGHESTATGLMWSIAHLTQHPHFLQKAKEEQEEILKKRPDSQKQLSLDEIKQMTYLSNVINEMLRYANIAFSIFREATSDVNIKGYLIPKGWRVLIWARAIHMNPEYYPNPEEFNPSRWNEYTTKAGTFLPFGAGSRLCPGADLTKLEMTVFLHYFLLNYRLERINPECPVTTLPCRPTDYCLAKVIKVSQLS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00872 463 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 PRINTS P450 superfamily signature 271 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 Gene3D Cytochrome P450 36 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 SUPERFAMILY Cytochrome P450 49 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 402 411 IPR017972 GO:0005506|GO:0016705
Tsu02g00872 463 PRINTS E-class P450 group I signature 399 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 PRINTS E-class P450 group I signature 367 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 PRINTS E-class P450 group I signature 280 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 PRINTS E-class P450 group I signature 260 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 PRINTS E-class P450 group I signature 409 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 PANTHER CYTOCHROME P450 26 46 438 - -
Tsu02g00872 463 Pfam Cytochrome P450 54 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00872 463 PANTHER CYTOCHROME P450 88D6 46 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00872 Tsu-Chr2 7347629 7353482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00872 49 459 Cytochrome P450 AT2G32440 49.879 6.17e-149 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00872 K04123 K17875 ag:BAG68929 664.84