Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00837 ATGGAGTGGAATCTGCTGAAGGATTTTGAACTTGAACCGAAGAATCGTTCTGTTGAAGCTCTTAGAAGATGGAGATCCGCCGTCACTCTCGTCAAAAACCGCCGTAGACGATTCCGTATGGTTGCCGATCTTGATAAACGCTCTGAAGCTGAACAGATTAAGCAGGGAATCAAGGAAAAAATTCGCATTGCTCTTTATGTTCAGAAGGCAGCATTGCAATTTATTGATGCTGGTAATCGAGTTGAATACAAGCTATCACAAGAGGCAATAGAAGCTGGTTTTGACATTCATCCAAATGAGATTGCTTCTATTGTTCGTAGTCAGGATTATAAGAACTTGAGTAATAACGGTGGAGTTGAAGCCGTTGCAAGGAAACTGTCGGTTTCTACAGATGAAGGTGTCAGTGAAGCAAGTGTAGATTGCAGACAACAAATATTTGGGGCGAATCGTTATACAGAGAAACCTTCAAGATCATTCCTGATGTTTGTTTGGGATGCATTGCAGGACTTAACTCTAACCATTCTCATGGTTTGTGCTGTAGTTTCTATAGGTATTGGGCTTGCCACTGAAGGGTGGCCAAAGGGAACATATGACGGTGTGGGAATCATACTCAGTATATTCTTGGTAGTCATTGTTACTGCTGTCAGTGACTACAAGCAATCCTTGCAGTTCTTGGATTTGgacaaagagaagaaaaagatcTTTGTTCATGTCACTAGGGatggaaaaagaaagaagatctCAATTTACGATATAGTAGTTGGTGATATTGTTCATTTGTCAACTGGAGATCAAGTACCAGCTGATGGAATTTATATATCTGGATACTCTTTGCTTATCGATGAATCAAGTTTGTCAGGTGAGAGCGAACCTGTATTTATAACTGAAAAACACCCTTTCCTTCTCTCAGGAACTAAAGTGCAGGATGGTCAGGGGAAGATGTTAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAATTGATGGAAACTCTAAATGAGGGAGGAGAGGATGAGACCCCGTTGCAGGTGAAATTGAACGGAGTCGCTACTATTATTGGTAAAATTGGTTTGGCTTTTGCCATTGTGACATTTTTGGTATTGACTATAAGGTTTCTTGTTGAAAAAGTACTTCATGGCGAGTTTAGTAATTGGTCTTCAAATGATGCAACGAAGCTACTGGACTTCTTTGCTATTGCTGTAACCATAATAGTTGTTGCAGTTCCTGAAGGGTTACCACTGGCTGTGACACTCAGTCTTGCTTTTgcaatgaaaaaattaatgaatgacATGGCACTTGTGAGACATCTTTCAGCTTGTGAGACTATGGGTTCAGCCAGTTGCATTTGCACAGATAAGACAGGGACATTGACCACTAACCATATGGTGGTTAACAAAATATGGATATGTGAAAAAACCACCCAGTTGAAAGGTAATGAGAGTGCAGATGAACTGAAAACAAACATTAATGAAGGAGTTCTAAGCATCCTTTCACAGGctatatttcaaaatacttCTGCTGAAGTGGTTAAGGATAAAAATGGAAAGAACACAATATTGGGAAGCCCAACAGAATCAGCATTATTGGAATTTGGCTTGCTTTTGGGTTCTGATTTTGATGCTCGCAACCGTAGTAAAGCTTATAAGATACTTAAGCTTGAGCCATTCAATTCAGTCCGGAAGAAGATGTCTGTACTCATCGGTCTCCCTGATGGAAGGGTCCAAGCTTTCTGCAAAGGTGCATctgaaataatattaaatatgtgtGACAAAATTATCGATTGCAACGGTGAAGTCATTGATCTTCCTGCAGACCGTGCAAGTAATGTCTCAGATGTTATAAATAGCTTCGCCTCTGAAGCTTTAAGAACGCTGTGTTTAGCTGTCAAAGATATAAATGAAACTCAAGGAGAACCTAATATTCCTGATAGTGGTTATACTCTAATAGCTTTAGTTGGAATCAAGGATCCTGTACGCCCTGGGGTTAAGGAAGCTGTTCAAACTTGTATTGCAGCTGGAATAACCGTCCGCATGGTCACTGGTGACAACATAAATACAGCGAAAGCTATAGCTAAAGAATGTGGCATACTTACTGATGATGGTGTTGCCATAGAGGGACCAACTTTTCGTGAATTGTCTGATGGGCAAATGAAGGATATCATACCAAGAATCCAGGTTCTGATCTCATTGTATATTCTGTGA 2202 0.3896 MEWNLLKDFELEPKNRSVEALRRWRSAVTLVKNRRRRFRMVADLDKRSEAEQIKQGIKEKIRIALYVQKAALQFIDAGNRVEYKLSQEAIEAGFDIHPNEIASIVRSQDYKNLSNNGGVEAVARKLSVSTDEGVSEASVDCRQQIFGANRYTEKPSRSFLMFVWDALQDLTLTILMVCAVVSIGIGLATEGWPKGTYDGVGIILSIFLVVIVTAVSDYKQSLQFLDLDKEKKKIFVHVTRDGKRKKISIYDIVVGDIVHLSTGDQVPADGIYISGYSLLIDESSLSGESEPVFITEKHPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIGLAFAIVTFLVLTIRFLVEKVLHGEFSNWSSNDATKLLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDMALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWICEKTTQLKGNESADELKTNINEGVLSILSQAIFQNTSAEVVKDKNGKNTILGSPTESALLEFGLLLGSDFDARNRSKAYKILKLEPFNSVRKKMSVLIGLPDGRVQAFCKGASEIILNMCDKIIDCNGEVIDLPADRASNVSDVINSFASEALRTLCLAVKDINETQGEPNIPDSGYTLIALVGIKDPVRPGVKEAVQTCIAAGITVRMVTGDNINTAKAIAKECGILTDDGVAIEGPTFRELSDGQMKDIIPRIQVLISLYIL 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00837 733 Gene3D - 165 446 - -
Tsu02g00837 733 Gene3D - 16 77 - -
Tsu02g00837 733 Pfam Cation transport ATPase (P-type) 504 592 - -
Tsu02g00837 733 Pfam Cation transporter/ATPase, N-terminus 116 182 IPR004014 -
Tsu02g00837 733 Gene3D - 447 726 IPR023214 -
Tsu02g00837 733 SUPERFAMILY HAD-like 643 727 IPR036412 -
Tsu02g00837 733 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 662 IPR023299 GO:0000166
Tsu02g00837 733 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 105 727 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Tsu02g00837 733 Gene3D - 460 657 IPR023299 GO:0000166
Tsu02g00837 733 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Tsu02g00837 733 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Tsu02g00837 733 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Tsu02g00837 733 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Tsu02g00837 733 PANTHER CALCIUM-TRANSPORTING ATPASE 45 728 - -
Tsu02g00837 733 PRINTS Sodium/potassium-transporting ATPase signature 576 594 - -
Tsu02g00837 733 PRINTS Sodium/potassium-transporting ATPase signature 200 220 - -
Tsu02g00837 733 PRINTS Sodium/potassium-transporting ATPase signature 443 464 - -
Tsu02g00837 733 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Tsu02g00837 733 SMART Cation_ATPase_N_a_2 109 187 IPR004014 -
Tsu02g00837 733 Pfam E1-E2 ATPase 235 428 - -
Tsu02g00837 733 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 202 474 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu02g00837 733 Gene3D - 133 333 - -
Tsu02g00837 733 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 49 IPR024750 GO:0005516
Tsu02g00837 733 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Tsu02g00837 733 PANTHER CATION TRANSPORTING ATPASE 45 728 - -
Tsu02g00837 733 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 504 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00837 Tsu-Chr2 7020920 7027652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00837 57 727 Primary Pumps ATPases AT3G57330 68.554 0.0 945
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00837 K01537 - gmx:100783489 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00837 02 7020920 7027652 Tsu02g00837 02 7020920 7027652 ECH