Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00807 ATGTCTCATCCAACAACTCTAAAGTATGATGTGTTTCTCAGTTTTAGAGGAGAGGATACTCGTGAAAACTTCACGAGTCATCTTTATAAAGATTTGTGTaggaaaaatattgaaacattCATAGATTATAGAATTGAGAGCGGTGATGAGGTTTCACCAGCACTGAACAATGCAATTGAAAATTCAACAATTTATGTTGTGATTTTGTCGGAACATTATGCTTCTTCGAGATGGTGCTTGGATGAACTCAAAAAGATACTAGATTGTAGGCAGAGACATGGAAGGGAAGTGATACCGGTGTTTTATAAGGTGGATCCATCAGATGTCAGACATCAGAGAGGGAGTTATGAAAAAGATATTATTGAGCAGCATAAGCGATTTGGCAACAAAGTGGACGCGTGGAAGGCTGCTCTAACTCAAGTAGCCAATCTCTCGGGCTTGGATTCAAGAAAATTCAGTCTTAAGAATGCCAATGTCGATGAAAGCAAAATATATGAAGTTACAGAGATGGATTATCAAGATTCTCTAAAACTCTTTTGTTCATTTGCCTTTAAACAGAACCACCCAAAAGAATCTTTTGTGAGCTTAACAAAAAAGGTTTTAGATTATGCTAAAGGGCTTCCATTAGCTCTCAAAGTTTTGGGCTTGTTGCTTTATGGAAAAACAAAGGAAGTATGGGAAAGCCAGTTGCAAAAGCTTAAAAAGCTTCCCGATCTTAAAATTTTCAGCTTGTTGAAGTTGAGTTATGATGAACTCGACGAAGAACAAAAGGATATATTTCTTGACATTGTTTGCTTCTATAGAGGAGAACTGGAGAAAGTTGTAGAACAAATGTTGGATTGTTGTGGTTTCTCTGCTTGCAAAGGAATGGATGATCTCAAAGATAGGGGCCTTATATCTATTTCAAAATATGGTACTGTTTGGATGCATGATCTAATACAAGAAATGGGGCATGAAATTGTTCGGCTTCAAGATAAAGATGGAAAACGTAGTCGATTATGGAAGTCTAACGATATTTATGACTGTTTATGTAAGAACAAGGGAAAGGGAACTGAGGAAATCCAGTGTATATTCCTAGACATGGAAGAAATGATGAAAATAAAGAAAGTTGAAACATTCAAGAAAATGCATAAACTTAGAATGATCAATTTCTATACTCAAACCGCCAAACTGATCTATACTAGTACAAGGTTGATTGAATCACCTGTGACTTTTTATACTTCTCTTGACAGTTTTCCTGATCATTTAAAATTTCTATGTTGGGATGCATTCCCTCAAAGATCTTTGCCACAAGACTTTTGCCCAGAAAATCTTGTTATACTTGATATGCGTTACAGCAAACTTGAACAACTTTGGGAGGGGGATCAGGCTTTACCAAAATTGAAAAGGCTCAACCTCAGTCATTCCAAGAAGCTGGTTCGAGTACCAGACCTCTCCTTATCTCCAAATATTGAAGAAGTCATTCTTCATCGTTGTGAAAGTTTGATAGAAGTTTACTCCTCTGCCTTCCTGGACAACCTTAACTGGTTATGGTTAGGTCATTGTAGCAAACTTGAGAGGTTAGATATTCGTAGCAATATTCTGTGGAGATCATCTGGATTAGTTAATCTCGATGGTTGTTACAAACTTGAAACGCTTTTAATCAGCGGTAGAACTGATGTGGTTCAAACATACATATATTCTGATAATTGTGTATATTCTGACTTGGGAGGATATCGTTTTGATTGGCCTGAAATGTCAATATGTAGTAAGAATGATGAGGGGGATCACGAGATTTTGGAAGGGGATTACGAGATTTTCGAAGGCGAGGAAAAGACTGTTGTTGTTACAAGTTTCAATGAGCTTTGTTGGTTGCATATTGCGAGGTGCAAGTCCCTAACATGCCTACCAGCTGagcttttcaatttcaagttTCTAAGAAGACTTTGTCTCAATGGTTGTTCAAAGTTGGAGGTGTTACCTGAATTCGAGGAGACTATGGAAAATCTAAAAGTACTCCTCTTAGAATTTACAGCAATAAAAGAACTACCTTCATCCCTGCACCATTTGGTCGGGCTTGAAAAATTGAGCTTACGAGGTTGCACAAAGCTTAAGACTATTCCATCTTCCATTGGAAATCTTAGTAAACTCCTCGAGTTAGAACTTTCCTACTGTGAATCACTTGAAACTTTTCCAAGTAGCATTTTCAAATTGAAGTTGACAGAACTCGATTTCGAGGGTTGCAAAATGCTTGGGACCTTTCCAGAAATACCAAATGAGTTTGGCCGCTTGTCATCCTTGATTGAACTTTCACTGCAAGGAAGTAGTATTGTGAACCTTCCTGAGAGTATGGCTCATCTGTCAAGTTTGAGATCACTTAATATAAGTGGTTGCAAATTGCTTGAATGTGTACCAAAGCTTCCACCAAATCTAAAGGAAGTTTTGGCATTTAAATGGCGTTCCATTAAGAGAATGATGCTAAATTCAGGGTCTGATTCTAAAGAAGGTACCTTCAAATTATATCTCaccaaaagaaaagaattagATGCTACTTCTTTGAGTAATATTGAGAAGGAAGCATATATAAAGATCAATAATGATGCATATTCGTCAGTGTTGTTCTGTTTTCCAGGAAGTGCAGTTCCTGATTGGTTCCCTCACCGTTGTCAGGGACATTCAATAACTATAAGAAGTGATGATTTATATTTGTACCAGAGAAACAGGTTTATTGGTTTCGCTCTGTGTGTGGTTTTGCAACGTGACTTTCCATTGGACATCTCTTGGGATGATAGTAGGTTTGCATACgcattaaaatttgaatatgatgGTCATACCAACAACCTTCAAATTAAATGCGATTGGGAGGATAGAAGATTTACCCAAGATCACACATTCCTATGGAAGTATGAATTGGGCAACAGGCACATTCATGCCCCCACAATCACTTTTGAGATCCTAGATGTGCATGGTAGTCCCTTAAGTTTTCCAGCAACAAAGACGGTGAAAGAATGTGGAGTATGTCCTCTGTATACCAAacaaaatgatgatgatgatgatgatgatgagggcAACAATGAAGAACCGAGTGGGGATGCAGTATGTTTGTTGGATTTGGATCTCTCCTTAGGTGgtccttccGTTAACTTGATGACGTGGAACGACCTAAACGATACATAA 3156 0.366 MSHPTTLKYDVFLSFRGEDTRENFTSHLYKDLCRKNIETFIDYRIESGDEVSPALNNAIENSTIYVVILSEHYASSRWCLDELKKILDCRQRHGREVIPVFYKVDPSDVRHQRGSYEKDIIEQHKRFGNKVDAWKAALTQVANLSGLDSRKFSLKNANVDESKIYEVTEMDYQDSLKLFCSFAFKQNHPKESFVSLTKKVLDYAKGLPLALKVLGLLLYGKTKEVWESQLQKLKKLPDLKIFSLLKLSYDELDEEQKDIFLDIVCFYRGELEKVVEQMLDCCGFSACKGMDDLKDRGLISISKYGTVWMHDLIQEMGHEIVRLQDKDGKRSRLWKSNDIYDCLCKNKGKGTEEIQCIFLDMEEMMKIKKVETFKKMHKLRMINFYTQTAKLIYTSTRLIESPVTFYTSLDSFPDHLKFLCWDAFPQRSLPQDFCPENLVILDMRYSKLEQLWEGDQALPKLKRLNLSHSKKLVRVPDLSLSPNIEEVILHRCESLIEVYSSAFLDNLNWLWLGHCSKLERLDIRSNILWRSSGLVNLDGCYKLETLLISGRTDVVQTYIYSDNCVYSDLGGYRFDWPEMSICSKNDEGDHEILEGDYEIFEGEEKTVVVTSFNELCWLHIARCKSLTCLPAELFNFKFLRRLCLNGCSKLEVLPEFEETMENLKVLLLEFTAIKELPSSLHHLVGLEKLSLRGCTKLKTIPSSIGNLSKLLELELSYCESLETFPSSIFKLKLTELDFEGCKMLGTFPEIPNEFGRLSSLIELSLQGSSIVNLPESMAHLSSLRSLNISGCKLLECVPKLPPNLKEVLAFKWRSIKRMMLNSGSDSKEGTFKLYLTKRKELDATSLSNIEKEAYIKINNDAYSSVLFCFPGSAVPDWFPHRCQGHSITIRSDDLYLYQRNRFIGFALCVVLQRDFPLDISWDDSRFAYALKFEYDGHTNNLQIKCDWEDRRFTQDHTFLWKYELGNRHIHAPTITFEILDVHGSPLSFPATKTVKECGVCPLYTKQNDDDDDDDEGNNEEPSGDAVCLLDLDLSLGGPSVNLMTWNDLNDT 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00807 1051 SUPERFAMILY RNI-like 416 668 - -
Tsu02g00807 1051 Pfam NB-ARC domain 149 235 IPR002182 GO:0043531
Tsu02g00807 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 263 IPR027417 -
Tsu02g00807 1051 PRINTS Disease resistance protein signature 204 218 - -
Tsu02g00807 1051 PRINTS Disease resistance protein signature 705 721 - -
Tsu02g00807 1051 ProSiteProfiles TIR domain profile. 7 175 IPR000157 GO:0007165
Tsu02g00807 1051 Gene3D - 172 253 IPR042197 -
Tsu02g00807 1051 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 167 530 IPR044974 GO:0006952
Tsu02g00807 1051 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 136 IPR044974 GO:0006952
Tsu02g00807 1051 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 615 915 IPR044974 GO:0006952
Tsu02g00807 1051 Gene3D Ribonuclease Inhibitor 358 528 IPR032675 -
Tsu02g00807 1051 Gene3D Ribonuclease Inhibitor 606 748 IPR032675 -
Tsu02g00807 1051 Pfam C-JID domain 869 1006 IPR045344 -
Tsu02g00807 1051 Gene3D Ribonuclease Inhibitor 749 850 IPR032675 -
Tsu02g00807 1051 Pfam TIR domain 8 152 IPR000157 GO:0007165
Tsu02g00807 1051 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 146 IPR035897 -
Tsu02g00807 1051 SMART till_3 8 144 IPR000157 GO:0007165
Tsu02g00807 1051 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 167 530 - -
Tsu02g00807 1051 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 6 136 - -
Tsu02g00807 1051 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 615 915 - -
Tsu02g00807 1051 Gene3D - 4 171 IPR035897 -
Tsu02g00807 1051 Pfam Leucine Rich Repeat 437 456 IPR011713 -
Tsu02g00807 1051 SUPERFAMILY "Winged helix" DNA-binding domain 240 343 IPR036390 -
Tsu02g00807 1051 SUPERFAMILY L domain-like 611 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00807 Tsu-Chr2 6792531 6797440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00807 623 999 WRKY Transcription Factor Family AT5G45050 24.402 3.06e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00807 - - lja:Lj1g3v1361010.2 611.298