Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00805 ATGCATATCAAACAAATCCAATCCTTGTTGCTCCTCGAGTTACTGAATGTTCGTATCACAGGAATATGGGGCATGGGAGGGATAGGCAAAACAACAATTGCTAGTGCAGTGTTTGAAAAACTCACAACTCAATTCAATTACAAAATCATCATTCTAAATGTTCAACAAGAAATCGAAAGAGTTGGACTAGACCATGTAAAAAGCAAATACTTATCAAAACTTCTAGGGGAAGACATTAAATCCTCTGAATATAATTTGTCATTTGATCCAAGGCTCACACGGATAAAGGTTCTTCttgtttttgatgatgtgaaaGATTCTGATCAACTTAAAGATTTAGTTGGAACACACAGGAGATGGATTATCAAGATTCTCTACAACTTTCCNTGTTTATTTGCctttaaacaaaaacaaccaataGAATCTTATGCGAGCTTAGCAGAAAAGGTTTTAGATTATGCTAAAGGGCTTCCATTAGCTCTCAAAGTTTTGGGCTCGTTGCTTTATGGCAAAACAAAGGAAGTATGGGAAAGTCAGTTGCAAAAGCTTAAAAAGCTTCCCGATCTTAAAATTTTCAGATTGTTGAAGTTGAGTTATGATGAACTCGACGAAGAACAAAAGGATATATTTCTTGACATTGTTTGCTTCTATAGAGGAGAACCGGAGAAAGTTGTAGAACAAATGTTGGATTGTTGTAGTTTCTCTGCTCGCATTGGAATGGATGTTCTCAAAGATAGGAGCCTTATATCTATTTCAGAATATGGTACTGTTTGGATGCATGATCTAATACAAGAAATGGGGCATGAAATTGTTAGGCTTCAATGTGTCAATGATCCTNGAAAAACGTAG 849 0.3451 MHIKQIQSLLLLELLNVRITGIWGMGGIGKTTIASAVFEKLTTQFNYKIIILNVQQEIERVGLDHVKSKYLSKLLGEDIKSSEYNLSFDPRLTRIKVLLVFDDVKDSDQLKDLVGTHRRWIIKILYNFXCLFAFKQKQPIESYASLAEKVLDYAKGLPLALKVLGSLLYGKTKEVWESQLQKLKKLPDLKIFRLLKLSYDELDEEQKDIFLDIVCFYRGEPEKVVEQMLDCCSFSARIGMDVLKDRSLISISEYGTVWMHDLIQEMGHEIVRLQCVNDPXKT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00805 282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 213 IPR027417 -
Tsu02g00805 282 Gene3D - 199 269 IPR036388 -
Tsu02g00805 282 PRINTS Disease resistance protein signature 154 168 - -
Tsu02g00805 282 PRINTS Disease resistance protein signature 19 34 - -
Tsu02g00805 282 SUPERFAMILY "Winged helix" DNA-binding domain 190 273 IPR036390 -
Tsu02g00805 282 Gene3D - 1 126 IPR027417 -
Tsu02g00805 282 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 129 281 IPR044974 GO:0006952
Tsu02g00805 282 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 129 281 - -
Tsu02g00805 282 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 115 - -
Tsu02g00805 282 Gene3D - 129 198 IPR042197 -
Tsu02g00805 282 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 115 IPR044974 GO:0006952
Tsu02g00805 282 Pfam NB-ARC domain 4 111 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00805 Tsu-Chr2 6780001 6781170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00805 5 271 WRKY Transcription Factor Family AT5G45050 31.773 3.59e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00805 - - lja:Lj1g3v3947020.2 291.197