Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00800 ATGAGACAATCTAACCTTCAAGCACTTGACTTAAGTGATTCCAAATGGCTTGAATGTATCCCAGAGCTTTCACCACATCTAAACCAATTTTTGGCATTTGATTGTTCATCCATTAATAGAGTGGTGCCATATTCAAGGTCGAAACTCCCGTCTGATTCCAAAGAAGGTACCTTCAAATTTCATTTCACCAATAGTCAACAACTAGATGAAACTTCTTGGAAAAATACTGGGTTTGAAGCATGGACTAAGATCACTAATGATGCATATAGGCTCGTTGGATTGGCTCTGTGTGTCGTTTTTAGAGGTGTAGATATGGAAGACACAGAAACAAGAATTAGTAGATTTGAATCAGTTAAGAAGCTCTTTCAACTAGGAGAAGATACCCGTGACAACTTCACCAGTCACCTTTATGCTGAATTGTGTAGGCAAAACATTGAAACATTCATAGATTATAGACTTGAGAGAGGCGAACATATTTCACCAGCACTGTACAAAGCAATAGAAGAATCAACAATTTATGTGATCATTTTATCAGAACACTATGCTTCTTCAAGTTGGTGTTTAGATGAACTGACAGAGATACTGAAATGTAAGGACAGATATGGAAGGGAAGTCATACCGGTGTTCTATAAGGCGGATCCATCAAATGTTAGGCATCAGAGACACAGTTATGCAGATGATTTAGTTAAACATCATCAACGATTTGGTCACAAAGTGGACACGTGGAAGGCTGCTCTAACCCAAGTAGCTGGAATTTCAGGCTGGGATTCACAAAAAACCAGACCAGAAAGCACACTTGTTACAGAGATTGTGAaagatattttgaaaaaattgaatagtTGTTTCTTAAGCAATTATAAAGGAATGACGGGAATTGACATTCATATTGAACAAATCCAATCGTTGTTGCTGCTTGAGTTGCCGACTGTTCGTATGATAGGGATATGGGGCATGGGAGGGATAGGAAAAACAACAATTGCCAGTGCAGTCTTTGAAAAACTCGCAACTCAGTTCTGTTCGAAAAGCATCATTCTAAATGTTCAACAAGAAATAGAAAGAGTTGGACTATCCCATGTAAAAAAAGAATACTTATCACAACTTCTAAATGAAAGAATTACATCCTCTGAATCCAATTCTTACTATCAAAGGCTGAAACAGACAAAGGAAATGGATGATCAAGTTTCTCTACAACTCTTCTGTCTATTTGCCTTTAAACAAAACCATCCAAAAGAATCTTTTGTGAGCTTAACAGAAAAGGTTTTAGATTATGCTAAAGGGCTTCCATTAGCTCTCAAAGTTTTGGGCTCATTGCTTTATGGAAAATCAAAGGAAGTATGGGAAAGTCAGCTGCAAAAGCTCGAAAAGCTTCCCGATCTTAAAATTTTTAGATTGTTTAAGTTAAGTTATGATGGACTTGACGGCGAACAAAAAGATATATTTCTTGACATAGCTTGTTTCCATAGAGGAGAATTTGAGAAAGATGTAGCATTAACATTGGATTCTTGTGGTTTCTCTGCTTACATTGGAATGGATGTTCTCAAAGATAGGTCCCTTATATCTATTTCAGAATATGGTACTGTTTGGATGCATGATCTAATACAAGAAATGGGGCATGAAATTGTTAGGCTTCAATGTGTCGATGATCCTGGAAAACGTAGTCGATTATGGAAGGCTAGTGATATTTACGATGTTTTAAGCAAGAAAATGGGAACAGATGCAATTCGGCGTATATTCTTAGATatgaaagaaataaagaaagttCAACTACATGCTGATACATTTAAGAAAATGCATAATCTTAGAATGATCAAGTTCGATAATGGCCATGCGAAAGACTCAAATGTGACCTTTCATGGGTTTCTTAAGagttttcctaatcatttaaaatttcttcattGGGATTGCTTCCCTCAAAGATCTTTGCCACATGACTTTTGTCCAAAAAATCTTGTTACACTTGATATGTCTCACAGCGATCTTGAACAACTCTGGGAGGGAGATCAGGCTTTACCAAAATTGAAAAGGCTCAACCTCAGTCATTCCAAAAAGCTGGTTCGAGTACCAGACCTCTCCTTATCTCCAAATATTGAAGAAGTAATTCTTCATGGTTGTGAAAGTTTGATAGAAGTTTACTCCTCTGCCTTCCTGGACAACCTTAACTGGTTATGGTTAGGTCATTGTAGCAAACTTGAGAGGTTAGATATTCGTAGCAATATTCTGTGGAGATCATCTGGATTAGTTAATCTCGATTGTTGTTACAAACTTGAAACGCTTTTAATCAGCGGTAAAACTGATGTGGTTCAATCATACATATATTCTGATAATTGTGTATATTCTGACTTGGAAGGATATTGTTTTGATTGGCCTGAAATGACAATAGAGAAGGATGATGAGGGGGATTACGAGATTTGGGAAGACGAGGAAACTACTGTTGCTACAAGTTTCAATGAGCTTTGTTGGTTGCAAATTGCGAGCTGCAAGTCCCTAACATGCCTACCAGCTGAACTTTTCAATTTCAAGTTTCTAAGGAGACTTTCTCTCGGTGGTTGTTCAAAATTGGAGGTGTTACCTGAATTCGAGGAGACTATGGAAAATCTAAAAGTACTCATCTTAGACCATACAGCAATAAAAGAACTACCTTCATCCCTGCACCATTTGGTCGGGCTTGAAAAATTGAGCTTACAAGGTTGCACAAAACTTAAGACTATTCCATCTTCCATTGGAAATCTTAAACTTAATTACTGTAAATCACTTGAAACTTTTCCAAGCAGCATTTTCAAATTGAAGTTGACAAAACTCGATTTCGTTGGTTGCTCAATGCTTAGTACCTTTCCGGAGATCTTGGATCCTGCAGAAAGTTTTGTTGACATTAACTTAACAGATACAGCAATTAAAGAACTACCTGCATCCTTGCACCTTTTGGCCGGGCTTGAAAAATTGAGCTTACGAGGTTGCACAATTAAGACTATTCCATCTTCCATTGGAAATCTTAGTAAACTCCTCCAGCTAGACCTTACCTACTGTGAATCACTTATTACTTTTCCAAGCAGcattttcaaattgaatttgACAAGACTCGATTTCGAGGGTTGCCCAATGCTTAGGACCTTTCCAGAAATCCCAGAAAACATTGGTTGCTTGTCATCCTTGACTGAACTTTCACTCCAAGGAAGCAGTATTGTGAACCTTCCTGAGAGTATGGCTCATCTCTCAAGTTTGAGATCACTTAATTTAAGTGATTGCAAATGGCTTGAATGTGTTCCAAAGCTTCCACCAAATCTAAACCAAGTTTTGGCATTCGATTGCCCTTCCATTAAGAGAATGATGCTAAATTCATGCTCTGATTCCGAAAAAGGTACCTTCAAATTACATCTCACCAATAGTCAAGAACTAGATGCCACTTCTTTGAGTAATATTGAAGAGGAAGCATATATTAAGATCAATGATGATGCATATAGGTCAGTGTTCTTCTGTTTTCCGGGAAGTGCAGTTCCTGATTGGTTCCCTCACCATTGCCAGGGACATTCAATAAATATAAGAAGCGATCCTTTATATTTGTGCGGGGGATACAGGCTTATTGGTTTCGCTCTGTGTGTTGTTTTGGGACGTGAAAATATGGATGGCACAAGAAccagaggaagaggaagaacaaCTCGCTTGACATACAAATTAGGATTTGAATACGATGGTCAACAAATGCACTTTTTATACGACCACTTGCCTATACAGTGTTCTTCATATAGTGATAGGTTTATCATCCAAGATCACACATTCCTATGGAAGTATCGATTCGACTTAGCAAGCATTGGCAACAAGCTCTTTAATGCCTACAACTTCACTTTTGAGATCTTAGATGAGCATTTTCGTCCCTTAAGTTTTCAATCAACCTTCACGGTGAAAGAATGTGGAATATGTCCTCTGTATACCAAACAAAATGATGATGGCAACATTGAAGAACCGAGTGGGGATGCAGTGTGTTTGTTGGATTTGGATCTCTCCTTAGCAGAGCCCGTGCTTCATAGGCAAGAACTTAATTACAATggattaacataa 4053 0.3701 MRQSNLQALDLSDSKWLECIPELSPHLNQFLAFDCSSINRVVPYSRSKLPSDSKEGTFKFHFTNSQQLDETSWKNTGFEAWTKITNDAYRLVGLALCVVFRGVDMEDTETRISRFESVKKLFQLGEDTRDNFTSHLYAELCRQNIETFIDYRLERGEHISPALYKAIEESTIYVIILSEHYASSSWCLDELTEILKCKDRYGREVIPVFYKADPSNVRHQRHSYADDLVKHHQRFGHKVDTWKAALTQVAGISGWDSQKTRPESTLVTEIVKDILKKLNSCFLSNYKGMTGIDIHIEQIQSLLLLELPTVRMIGIWGMGGIGKTTIASAVFEKLATQFCSKSIILNVQQEIERVGLSHVKKEYLSQLLNERITSSESNSYYQRLKQTKEMDDQVSLQLFCLFAFKQNHPKESFVSLTEKVLDYAKGLPLALKVLGSLLYGKSKEVWESQLQKLEKLPDLKIFRLFKLSYDGLDGEQKDIFLDIACFHRGEFEKDVALTLDSCGFSAYIGMDVLKDRSLISISEYGTVWMHDLIQEMGHEIVRLQCVDDPGKRSRLWKASDIYDVLSKKMGTDAIRRIFLDMKEIKKVQLHADTFKKMHNLRMIKFDNGHAKDSNVTFHGFLKSFPNHLKFLHWDCFPQRSLPHDFCPKNLVTLDMSHSDLEQLWEGDQALPKLKRLNLSHSKKLVRVPDLSLSPNIEEVILHGCESLIEVYSSAFLDNLNWLWLGHCSKLERLDIRSNILWRSSGLVNLDCCYKLETLLISGKTDVVQSYIYSDNCVYSDLEGYCFDWPEMTIEKDDEGDYEIWEDEETTVATSFNELCWLQIASCKSLTCLPAELFNFKFLRRLSLGGCSKLEVLPEFEETMENLKVLILDHTAIKELPSSLHHLVGLEKLSLQGCTKLKTIPSSIGNLKLNYCKSLETFPSSIFKLKLTKLDFVGCSMLSTFPEILDPAESFVDINLTDTAIKELPASLHLLAGLEKLSLRGCTIKTIPSSIGNLSKLLQLDLTYCESLITFPSSIFKLNLTRLDFEGCPMLRTFPEIPENIGCLSSLTELSLQGSSIVNLPESMAHLSSLRSLNLSDCKWLECVPKLPPNLNQVLAFDCPSIKRMMLNSCSDSEKGTFKLHLTNSQELDATSLSNIEEEAYIKINDDAYRSVFFCFPGSAVPDWFPHHCQGHSINIRSDPLYLCGGYRLIGFALCVVLGRENMDGTRTRGRGRTTRLTYKLGFEYDGQQMHFLYDHLPIQCSSYSDRFIIQDHTFLWKYRFDLASIGNKLFNAYNFTFEILDEHFRPLSFQSTFTVKECGICPLYTKQNDDGNIEEPSGDAVCLLDLDLSLAEPVLHRQELNYNGLT 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00800 1350 Gene3D - 394 473 IPR042197 -
Tsu02g00800 1350 SUPERFAMILY Toll/Interleukin receptor TIR domain 125 255 IPR035897 -
Tsu02g00800 1350 Pfam NB-ARC domain 385 455 IPR002182 GO:0043531
Tsu02g00800 1350 Pfam TIR domain 125 289 IPR000157 GO:0007165
Tsu02g00800 1350 SUPERFAMILY L domain-like 812 1138 - -
Tsu02g00800 1350 Pfam Leucine Rich Repeat 649 668 IPR011713 -
Tsu02g00800 1350 Gene3D Ribonuclease Inhibitor 563 775 IPR032675 -
Tsu02g00800 1350 SUPERFAMILY "Winged helix" DNA-binding domain 460 565 IPR036390 -
Tsu02g00800 1350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 284 483 IPR027417 -
Tsu02g00800 1350 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 816 907 - -
Tsu02g00800 1350 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 120 387 - -
Tsu02g00800 1350 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 909 1204 - -
Tsu02g00800 1350 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 387 741 - -
Tsu02g00800 1350 Pfam C-JID domain 1159 1311 IPR045344 -
Tsu02g00800 1350 PRINTS Disease resistance protein signature 312 327 - -
Tsu02g00800 1350 PRINTS Disease resistance protein signature 995 1011 - -
Tsu02g00800 1350 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 816 907 IPR044974 GO:0006952
Tsu02g00800 1350 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 120 387 IPR044974 GO:0006952
Tsu02g00800 1350 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 909 1204 IPR044974 GO:0006952
Tsu02g00800 1350 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 387 741 IPR044974 GO:0006952
Tsu02g00800 1350 SMART till_3 121 252 IPR000157 GO:0007165
Tsu02g00800 1350 ProSiteProfiles TIR domain profile. 114 278 IPR000157 GO:0007165
Tsu02g00800 1350 SUPERFAMILY L domain-like 578 762 - -
Tsu02g00800 1350 Gene3D - 122 281 IPR035897 -
Tsu02g00800 1350 Gene3D - 282 393 IPR027417 -
Tsu02g00800 1350 SMART LRR_typ_2 886 910 IPR003591 -
Tsu02g00800 1350 SMART LRR_typ_2 1047 1070 IPR003591 -
Tsu02g00800 1350 SMART LRR_typ_2 974 997 IPR003591 -
Tsu02g00800 1350 SMART LRR_typ_2 863 885 IPR003591 -
Tsu02g00800 1350 SMART LRR_typ_2 670 694 IPR003591 -
Tsu02g00800 1350 Gene3D Ribonuclease Inhibitor 813 952 IPR032675 -
Tsu02g00800 1350 Gene3D Ribonuclease Inhibitor 953 1150 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00800 Tsu-Chr2 6676262 6720367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00800 291 914 WRKY Transcription Factor Family AT5G45050 29.286 4.23e-65 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00800 - - ccaj:109803335 1103.97