Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00798 GGAAAGGGAACAGATGCAATCAAGTGTATATTCCTAGACATGACGGAAATTAAGAAAGTTCAACTACATGCTGAAACCTTTAAGAAAATGTGTAATCTTAGAATGATCAAGTTTTATAATGGTTGCTCAAATGTGACCTTTCGTGAGTTTCTCAAGACTTTTCCAGATCGTTTAAAATTTCTTTGTTGGGATGCATTCCCTCAAAGATCTTTGCCAGACTTTTGCCCAGAAAATCTTGTTATACTTGAAATGCCTTTTAGTGATCTTGAACAACCTTGGGTGGGGGATCAGgcTTTTCCAAATTTGAAAAGGCTTGACCTTAGCAATTCTAAGAAGCTGAGAGGAGTACCAAAcctctcattgtttccaaataTTGAAGAAATAATTCTTAGTGGTTGTTTAAAGTTGGAGGAGTTACCTGAATTCAAGGAGACTATGGAAAATCTAATAGTGCTCATGTTAGACAAAACGGCAATAAAAGAACTACCTTCATCCCTACACCGTTTGGTCCGGCTTGAAAAATTAAGCTTGCAAAGTTGCACAAGGCTTAAGACTATTCCAAACAACATTGGTCGCTTGTCATCGTTGACTGAACTTTCACTGCAAGGAAGCAATATTGTGAACCTTCCTGAGAGTATGGCTTATCTCTCAAGTTTGGAATTACTTGATTTAAGTGATTGCAAATGGCTTGAATGTATTCCAAAGCTTCCACCAAATCTAGACCGAGTTCGGGCATTTGATTGCCCTTCCATTAAGAGAATGATGCTAAATTCAAGGTTGAAACTCCTGTCTGATTCCGAAGAAGGTACCTTCGAATTTTGTCTCACCAATAGTCAAGAACTAGATGCAACTTCTTGGAGTAATATTAGAGAGGAAGCATGTATTAAGATCACTGATGATGCATATAGGTCAGTGTTCTTATGTTTTCCAGGGAGTGCAGTTCCTTGTTGGTTCCAGTACTGTTGTCGGGGACATTCAGTAACTATGAAAAAAGATTCTCAAAATTTGAGCAGTAAAAGTAGGCTCATTGGTTTTGCTTTGTGTGTTGTTTTGGGACGTGAAAATATGGATGGCACAAGAACAAGAGGTAGAAGCTTGACATACAAATTAGGATTTGAATACGATGGTGGACGAATACACTTTTTATATGACTGCTTGCATGTACATTGTTCTTCATATTGGCATGATCATCATAGTGATAGGTTCATTAGCCAAGATCACATATTCCTATGGAAGTATCGATTTGACTTAGCAAGCATTGGCAGCAAGCTCTTTAATGCCTACAACTTCACTTTTGAGATCTTAGATGAGGATTTTCATCCCTTAAGTTTTCAATCAACCTTCACGGTGAAAGAATGTGGATTATGTCCTCTGTATACCAAAGAAAATGATGATAATGGCATTTAA 1407 0.3696 GKGTDAIKCIFLDMTEIKKVQLHAETFKKMCNLRMIKFYNGCSNVTFREFLKTFPDRLKFLCWDAFPQRSLPDFCPENLVILEMPFSDLEQPWVGDQAFPNLKRLDLSNSKKLRGVPNLSLFPNIEEIILSGCLKLEELPEFKETMENLIVLMLDKTAIKELPSSLHRLVRLEKLSLQSCTRLKTIPNNIGRLSSLTELSLQGSNIVNLPESMAYLSSLELLDLSDCKWLECIPKLPPNLDRVRAFDCPSIKRMMLNSRLKLLSDSEEGTFEFCLTNSQELDATSWSNIREEACIKITDDAYRSVFLCFPGSAVPCWFQYCCRGHSVTMKKDSQNLSSKSRLIGFALCVVLGRENMDGTRTRGRSLTYKLGFEYDGGRIHFLYDCLHVHCSSYWHDHHSDRFISQDHIFLWKYRFDLASIGSKLFNAYNFTFEILDEDFHPLSFQSTFTVKECGLCPLYTKENDDNGI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00798 468 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 185 328 IPR044974 GO:0006952
Tsu02g00798 468 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 183 IPR044974 GO:0006952
Tsu02g00798 468 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 3 183 - -
Tsu02g00798 468 Gene3D Ribonuclease Inhibitor 3 293 IPR032675 -
Tsu02g00798 468 Pfam C-JID domain 309 462 IPR045344 -
Tsu02g00798 468 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 185 328 - -
Tsu02g00798 468 SUPERFAMILY L domain-like 8 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00798 Tsu-Chr2 6660206 6661755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00798 3 247 WRKY Transcription Factor Family AT4G12020 33.115 1.38e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00798 - - lja:Lj4g3v3113360.1 316.235