Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00794 ATGACTCAACAGAATGTGGTAGTTTCCGAGACGAAAACCGGAATCAACGGTGGTGGAAGTACTATTACCGTGGCACAAAAGCCACCAGCAGCACCAGGATACATTCCCATTCCAAGGAGGAGAATTTTGAAGAATCTTGAAATCAATGGTGGACAAAGAATCAATACATGGATTGATTCAATGAGAGCTTCATCTCCAACTCATGTCAAATCAACTCCTTCTTTGGCTGAAGAATACAACTCATGGATTCTTCGTCATCCATCTGCATTAGACATGTTTGAACAAATTATGGATGCTTCAAAAGGAAAACAGATTGTTATGTTTTTGGACTACGACGGTACTCTATCGCCTATAGTCGATGACCCTGACCGTGCTTTCATGTCTGAATCGATGAGGAAAACAGTTAGGCAACTTGCAAGGTGTTTTCCTACTGCAATTGTTACCGGAAGATGCATAGACAAAGTGTACAATTTTGTTCATTTGGCTGAATTGTATTATGCTGGCAGCCATGGCATGGACATTAAAGGGCCAACAAAAGTGTCCAAATACAACAAAAATAAGAAAGCAGAGGAAATTCTTTTACAACCTGCCAGAGAATTTGTTCCAATGATAAATGAGGTGTATGAACAATTAGTTGAGAAAACAAAATTGACTCCTGGTGCTAGAGTTGAGAATCATAAGTTCTGTGCTTCTGTTCATTTTAGATGTGTTGAGGAAAAGAGATGGATTGAATTGGCAGAGCAAGTTAAATCAGTTATAAAAGAGTACCCTAAGCTTCGTCTTACACAAGGAAGAAAGGTATTGGAGATTCGTCCCGCAATTAAATGGGACAAGGGCAAGGCCTTAGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTGTAACGATGTATTTCCTATTTATATTGGTGATGATAGAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGAATTCTTGTGTCTAAATTTCCAAAGGACACTACTGCTTCATACTCCTTACAAGAACCTAATGAGGTAATGGAGTTTCTTCAACGTTTGGTGGAATGGAAAAAAGTATCAACAAGATCACGTTCACGGGTGTAG 1101 0.3906 MTQQNVVVSETKTGINGGGSTITVAQKPPAAPGYIPIPRRRILKNLEINGGQRINTWIDSMRASSPTHVKSTPSLAEEYNSWILRHPSALDMFEQIMDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSESMRKTVRQLARCFPTAIVTGRCIDKVYNFVHLAELYYAGSHGMDIKGPTKVSKYNKNKKAEEILLQPAREFVPMINEVYEQLVEKTKLTPGARVENHKFCASVHFRCVEEKRWIELAEQVKSVIKEYPKLRLTQGRKVLEIRPAIKWDKGKALEFLLESLGFANCNDVFPIYIGDDRTDEDAFKKLRDRGQGFGILVSKFPKDTTASYSLQEPNEVMEFLQRLVEWKKVSTRSRSRV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00794 366 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 107 318 IPR006379 -
Tsu02g00794 366 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 366 IPR044651 GO:0004805|GO:0005992
Tsu02g00794 366 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 366 - -
Tsu02g00794 366 TIGRFAM T6PP: trehalose-phosphatase 103 353 IPR003337 GO:0003824|GO:0005992
Tsu02g00794 366 Gene3D - 203 365 IPR023214 -
Tsu02g00794 366 Gene3D - 105 202 IPR023214 -
Tsu02g00794 366 Pfam Trehalose-phosphatase 108 342 IPR003337 GO:0003824|GO:0005992
Tsu02g00794 366 CDD HAD_TPP 106 347 - -
Tsu02g00794 366 SUPERFAMILY HAD-like 106 356 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00794 Tsu-Chr2 6635138 6638167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00794 101 352 Trehalose Biosynthesis Gene Families AT1G70290 27.076 2.99e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00794 K01087 - gmx:100794430 621.698