Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00777 ATGGCACTCTCGTTCTCACTCTCTTCAAGCGTAACTGTTTCTAACCGTTTTCCTTCTTGTTGCATTTCGAAACTGAATAGTAAGAGTTGTAATGGGTTCAATAAAGTGTTAAGTTCGTCACGGAAAGATAAGCATCCGTTAATTGGAATTGGTTTGGGGTTTGTAACGGCTATGGTTATGGGATTAACGGCGTTAGATGCTGATGCAACGAGAATTGAATACTATGCTACTGTAGCAGAACCCACGTGTGAGCTTAATTATGCTAAGTCCGGGCTTGGTTATTGTGATGTTGTTGAGGGTTTTGGTGATGAAGCTCCTCTTGGAGAGCTTATTATTATTCATTATACTGCGAGATTCGGCGATGGGATTGTATTTGATAGTAGTTATAAACGCGGTAGACCGCTCACTATGCGCATTGGGGTTGGTAAGGTAATTAAGGGATTGGATCAGGGGATTTTGGGGGGTGAAGGAGTACCTCCGATGCGGATAGGTGGGAAACGTCAGCTAATGATTCCTCCATTGTTAGCATATGGCCCTGAACCTGCAGGGTGCTTCTCAGGTGACTGCAATATACCGGGCAACGCGACTCTTCTGTATGATATTAAACTTGTTGGTCTTTATACGGATGAACAACACATGGATTGA 645 0.4341 MALSFSLSSSVTVSNRFPSCCISKLNSKSCNGFNKVLSSSRKDKHPLIGIGLGFVTAMVMGLTALDADATRIEYYATVAEPTCELNYAKSGLGYCDVVEGFGDEAPLGELIIIHYTARFGDGIVFDSSYKRGRPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRQLMIPPLLAYGPEPAGCFSGDCNIPGNATLLYDIKLVGLYTDEQHMD 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00777 214 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 108 207 IPR001179 GO:0003755
Tsu02g00777 214 SUPERFAMILY FKBP-like 87 205 - -
Tsu02g00777 214 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 19 209 IPR044183 GO:0009507
Tsu02g00777 214 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 105 204 IPR001179 GO:0003755
Tsu02g00777 214 Gene3D - 80 206 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00777 Tsu-Chr2 6509868 6512479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00777 84 206 Calmodulin-binding Proteins AT5G48570 37.903 1.55e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00777 K01802 - gmx:100500547 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00777 02 6509868 6512479 Tsu02g00777 02 6509868 6512479 ECH