Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00767 ATGGATTCTTCATCTTCCCAATATGTTTCCACAAGAAGTTTTGGTGTATATGATCCTACCCATCAATTTACTATATGGGAAGATCATTTCAAGAGTAATGGTGATTTAAGTGTGTATGAACCTAACATGAAGTTTAATAATCAGTCAGAGGATGCTTCTTTTGGAATATTGGGAACATCTATCAAGTATGACCAACAAGCTAACAAACTTACTGAGAAGATGCAAAGACGTCTCGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTTTGAAGAAAAAGGCTCACATACAACAGTTAGAATCGTGTCGTTTGAAGCTAGTGCAGGTAGAGCAAGAGCTAGATAATACAAGACAACAGGGATTGCATATTGGTGGTGGATTGGATTCTAATAATTTAGGCTTTGCTGGTTCTGCAAATTCAGAAATAACAACTTTTAAGATGGAGTATGAACATTGGGTGgaagaacaaaacagacaaatCTTGGAATTGAATAGTGCTTTAAGTGCTCATATAAGTGACATACAGATTGGGGAACTTGTAAATGGCATCATGAATCACTATTTCAAACTCTTTTGCATGAAATCTGATGCTGCAAAAGTAGATGTTTTCTATGTTATCACCGGCATGTGGAAAACAACATCTGAACAATTTTTCTTGTGGATTGGAGGTTTTCGCCCCTCCGAACTTCTAAAGGTTCTGGTCCCTTTGATTGAACCATTGACAGAAGAGCAGCGGTTTGATGCCTATAATCTTGAAAAGTCATGCCGGCAAGCAGAAGACGCCCTTTCGCTAGGTATGGAAAAACTCCAGGGAATGCTTACCGACACAGTAGCAGAAGGACAGCTCATTGAAGGAATTTATACTCCACATATGGATACTGCAATAGAGAGGCTGGAAGCTCTGGCTAGCTTTGTCAACCAGGCTGATCATCTACGACAGGAAACCTTGCAGCAGATGTCTCGAATACTCACCATACGTCAAACTGCTCGATGGCTGCTTGTTTTGGGTGAGTATTTTCAACGACTAAGGGATTTGAGCAAGGTTTGGGCCAATCGTGGACGTGAACCTGCTTAG 1074 0.4013 MDSSSSQYVSTRSFGVYDPTHQFTIWEDHFKSNGDLSVYEPNMKFNNQSEDASFGILGTSIKYDQQANKLTEKMQRRLAQNREAARKSRLKKKAHIQQLESCRLKLVQVEQELDNTRQQGLHIGGGLDSNNLGFAGSANSEITTFKMEYEHWVEEQNRQILELNSALSAHISDIQIGELVNGIMNHYFKLFCMKSDAAKVDVFYVITGMWKTTSEQFFLWIGGFRPSELLKVLVPLIEPLTEEQRFDAYNLEKSCRQAEDALSLGMEKLQGMLTDTVAEGQLIEGIYTPHMDTAIERLEALASFVNQADHLRQETLQQMSRILTIRQTARWLLVLGEYFQRLRDLSKVWANRGREPA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00767 357 Coils Coil 67 87 - -
Tsu02g00767 357 PANTHER TRANSCRIPTION FACTOR TGA9 1 356 - -
Tsu02g00767 357 SUPERFAMILY Leucine zipper domain 73 106 IPR046347 GO:0003700|GO:0006355
Tsu02g00767 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 71 113 IPR004827 GO:0003700|GO:0006355
Tsu02g00767 357 Coils Coil 92 119 - -
Tsu02g00767 357 Pfam Seed dormancy control 160 234 IPR025422 GO:0006351|GO:0043565
Tsu02g00767 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 76 91 IPR004827 GO:0003700|GO:0006355
Tsu02g00767 357 ProSiteProfiles DOG1 domain profile. 142 352 IPR025422 GO:0006351|GO:0043565
Tsu02g00767 357 SMART brlzneu 69 151 IPR004827 GO:0003700|GO:0006355
Tsu02g00767 357 Gene3D - 71 122 - -
Tsu02g00767 357 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 356 - -
Tsu02g00767 357 Pfam bZIP transcription factor 73 102 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00767 Tsu-Chr2 6420066 6422746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00767 1 356 Calmodulin-binding Proteins AT5G10030 60.882 2.70e-159 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g00767 DOG1 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00767 K14431 - gmx:100780003 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00767 02 6420066 6422746 Tsu02g00767 02 6420066 6422746 ECH
Tsu02g00767 02 6420066 6422746 Tsu07g02313 07 26211938 26219870 ECH
Tsu02g00767 02 6420066 6422746 Tsu07g02313 07 26211938 26219870 PCT