Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00760 ATGAAAAAAGCGCAAAATGAATTAGAAATTGTGGTGGGTATGAAGAGAAAAGTGGAGGAATCAGATTTGAACAAGTTAGAGTATTTGTACATGATTATAAAAGAAAGCCTTAGGCTCCATCCAGTAGCACCGCTATTAGTACCACACCAATCCTTGGAAGATTGCATGGTTGAAGACTTTTTCATACCTAAAAAATCAAGGGTCATTGTAAATGCATGGTCAATTATGAGAGACTCAAATGCATGGACTGATCCAGAAAGGTTTTGGCCTGAGAGATTTGAAGGAAGCAACATAGATGTTAAAGGTCATGATTTTCAACTCATACCATTTGGCTCTGGTAGAAGAGGTTGTCCTGGATTGCAATTGGGACTAACTGTGATTCGTTTAGTGGTGGCTCAACTTGTGCATTGCTTTGATTGGAAATTGCCTAATCATATGTTACCAACTGATTTGGACATGACAGAAGAGTTTGGTCTTACAATGCCTAGAGTCAGTCATCTAATTGCCATCCCTGTATATCGCCTTTGTAATCGTTGCGATTAG 543 0.3886 MKKAQNELEIVVGMKRKVEESDLNKLEYLYMIIKESLRLHPVAPLLVPHQSLEDCMVEDFFIPKKSRVIVNAWSIMRDSNAWTDPERFWPERFEGSNIDVKGHDFQLIPFGSGRRGCPGLQLGLTVIRLVVAQLVHCFDWKLPNHMLPTDLDMTEEFGLTMPRVSHLIAIPVYRLCNRCD 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00760 180 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 110 119 IPR017972 GO:0005506|GO:0016705
Tsu02g00760 180 Pfam Cytochrome P450 1 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00760 180 PRINTS P450 superfamily signature 31 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00760 180 PRINTS P450 superfamily signature 108 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00760 180 PRINTS P450 superfamily signature 117 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00760 180 SUPERFAMILY Cytochrome P450 1 174 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00760 180 PRINTS E-class P450 group I signature 30 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00760 180 PRINTS E-class P450 group I signature 71 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00760 180 PRINTS E-class P450 group I signature 107 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00760 180 PRINTS E-class P450 group I signature 117 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00760 180 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 176 - -
Tsu02g00760 180 PANTHER CYTOCHROME P450 93A3-LIKE 1 176 - -
Tsu02g00760 180 Gene3D Cytochrome P450 1 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00760 Tsu-Chr2 6368333 6368875 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00760 1 175 Monolignol Biosynthesis Gene Families AT4G36220 54.545 6.78e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00760 K20562 - mtr:MTR_0451s0010 304.679