Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00739 atggatgatttttttgatgatgatattgCTCCTATTGTTCCTACTACACGTGCTAAACCAGGTGCAAGGTTTGCGCCGAAGGTGAAGGCGAAACCAAAACAACCTATTCAAAAGAATGTATCTGCATCATCATCAGAAAATGCAACTTCATCTAAAGATGGGAACAATGTGCTTGTTGATTCATCAACCACTCACAAAGAATCTGAAGGAGTTTCTCAGAATGAATCACATGATGTAGTTGCTGTAAGTTCCTCAATTGAAGAACCTATAAGGTCTGGTCATAATAATCCTGATGTCAATAATGTAACAGGGCAATCGGTTCAGCCTACTAATGCTGTAGAGAGTGTATTGAATAGTGCAGCTGCTCCATCTACTGATTGCACAACCATAGGTAGGAACAAAGAGTTGTCTGTAAATGGAGAAGGTTCATTTCTTGATAGCAACAAGAGTTTCGAAGTTATTGATAATTCATTGGAAGGTAGCCTAAATGTGGGCTTCAAAAGTGCTTCAGGCGACAGTAACACTGGAATATCTGAGAGCAACATCCattcaaattttgagtttggaGAACTGCCACAGGTCTTGTCTTCGGAATTTGAGTTTGATCCTTTCAGCGATGTCCTCCCTGATCCTGGCACTAGGAATGCCAAAAAGTTTCAACCCAAGATGAAGCCACGACCTAGAGTCAGCAATACACCAGCTACTGCTTCTGCTTCATCTGGTAGGCCATTCTCTGAAGACAATAGAAGCTTGGAAGCAGTTATTCCTTCTCATCCAGATTCCCTGAATGCCATGATATCAGAGACTGTAGTTCATGATGGAACTACAGATTTGCCTTCTAGCTTTGGTAAATCAGCTGCAGAGACTGCAGATATTTTTTCCGGGCTAGAATCACTTGATGACATTCTCAACCAAGCTGCAACTGATACAGGAAAACCAGATGTGAAGGGTGCAGAGGAAAATTTTGTCGTTCCGGGATATGATAGCAAAAGTAGGACAGAAACACAGGAAGGCACGGATTTGAATACTGACTGCCCAATTGACAATGTCTATGATTATCAATCCATGAAATCTGGCACAGATCCAACATCTGAAATTCCAAGGCATGAAGGGTTGACAAATTCTGCAGATAGTCCCACATTGGCTGACTATTTGCAGCAAGACGGTACTGGAGAGAAACAAGATGctaatgagagaaaaaaatctGTAAAGAAGAATAAAAGATCGTCAATTGCTGGTGTGGAAGATAAAGGAGGTAAAACCTCAAGGAAACCGAGAAAACAACCAGTTCGTAAACCTGCTAAAAACTCATTAAATGAGCCTattgaggatgatgatgatgtccTCGACCCTCCTTATGAGTTTGATGGAGACGAACTTGAAGAAAATGACGATGAGAATGAAGTGGATAATTCATCCAAGAAAAAACGAGCATCAACAAGTTCTAAGAAGAAATCTGTGGCTAAAAATGGAAAAGCATCTGGAAAACGCAAGAAGGCTAATGATGATTTAGACAAGGTTACTGAAGCACCTCCTAAAAAGTTCTCGCATTCATCTCGGCGAAGAAAAAGATGTGtGGACAAGGCTTTGCTGGATGATGAATATCTTGATCAACGAACATTACCTCTTAGGGATATTATTTTACTTGCAGAACATAAGGAGCGATTGGCGAAAAAGGAGGCAACAACTACTAATACATCTTCCACCAATCAAAGCAATGGGGATTTTCTTCATGAGACTGATGTTAATAATGGAGAGGAGTTTTATGGGTCAGATGATGGTTATAGAGACCCATATGATGATGGTTACAGAGACCCATATGATGGTCAATATCAAGCCAGTGAAAATATTACATCAACTGCTCCTTTATTGAATTACCAGTCATTCATGGACAAGGCACCTAGGGGGAAATGGTCAACACGAGATACTGAAAAGTTTTATGAGGCTATTAGGCAGTTTGGCACAGATTTTACTATGATACAACAGCTTTTCCCTGATAAAACACGTCATCAAATTAAGTTGAAGTACAAGAAGGAAGAGCGGCAACATCCTTTACTGTTATCTGATGCTGTGAATAATCCTACAAAAGatctttctttatttaaattGGTGATTGAGAGACAGATTCAGAAGTCTAAGGAAGAACAAGATGCCGCTGGAGATGCTGGAGATGCGTCAGATTTAATGCCTGGGGAGGAGGTCGAGGACCCGACACCAGGAACTAATGAAGAGGTTGCAACAACTCAGCAGGAGCAGGACCACATTAATGTTAAAGATCAGGAAGATTCTATGGCATATCCAGTTCCAGGGaaatctgatgatgatgatgacgacgacGATGGTGAAGATCCGTTACTAAAATGGTCTCAGTATCAAAGTTCTATTTAG 2388 0.3886 MDDFFDDDIAPIVPTTRAKPGARFAPKVKAKPKQPIQKNVSASSSENATSSKDGNNVLVDSSTTHKESEGVSQNESHDVVAVSSSIEEPIRSGHNNPDVNNVTGQSVQPTNAVESVLNSAAAPSTDCTTIGRNKELSVNGEGSFLDSNKSFEVIDNSLEGSLNVGFKSASGDSNTGISESNIHSNFEFGELPQVLSSEFEFDPFSDVLPDPGTRNAKKFQPKMKPRPRVSNTPATASASSGRPFSEDNRSLEAVIPSHPDSLNAMISETVVHDGTTDLPSSFGKSAAETADIFSGLESLDDILNQAATDTGKPDVKGAEENFVVPGYDSKSRTETQEGTDLNTDCPIDNVYDYQSMKSGTDPTSEIPRHEGLTNSADSPTLADYLQQDGTGEKQDANERKKSVKKNKRSSIAGVEDKGGKTSRKPRKQPVRKPAKNSLNEPIEDDDDVLDPPYEFDGDELEENDDENEVDNSSKKKRASTSSKKKSVAKNGKASGKRKKANDDLDKVTEAPPKKFSHSSRRRKRCVDKALLDDEYLDQRTLPLRDIILLAEHKERLAKKEATTTNTSSTNQSNGDFLHETDVNNGEEFYGSDDGYRDPYDDGYRDPYDGQYQASENITSTAPLLNYQSFMDKAPRGKWSTRDTEKFYEAIRQFGTDFTMIQQLFPDKTRHQIKLKYKKEERQHPLLLSDAVNNPTKDLSLFKLVIERQIQKSKEEQDAAGDAGDASDLMPGEEVEDPTPGTNEEVATTQQEQDHINVKDQEDSMAYPVPGKSDDDDDDDDGEDPLLKWSQYQSSI 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00739 795 MobiDBLite consensus disorder prediction 443 467 - -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 1 99 - -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 353 391 - -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 712 795 - -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 478 494 - -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 206 247 - -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 230 246 - -
Tsu02g00739 795 Gene3D - 638 716 - -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 558 580 - -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 307 523 - -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 328 343 - -
Tsu02g00739 795 SUPERFAMILY Homeodomain-like 636 684 IPR009057 -
Tsu02g00739 795 CDD SANT 637 678 IPR001005 -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 392 423 - -
Tsu02g00739 795 Pfam Myb DNA-binding like 628 712 IPR039467 -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 495 515 - -
Tsu02g00739 795 SMART sant 634 682 IPR001005 -
Tsu02g00739 795 PANTHER TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG 214 779 - -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 561 579 - -
Tsu02g00739 795 ProSiteProfiles SANT domain profile. 637 681 IPR017884 -
Tsu02g00739 795 MobiDBLite consensus disorder prediction 36 81 - -
Tsu02g00739 795 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 214 779 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tsu02g00739 Myb_DNA-bind_7 1.5e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00739 K15198 - gmx:100792788 600.512