Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00731 ATGGACTACTATTTTGTAAACCATCATCATGCTACTCCTAACTTTGCTCAATCTAATCATCATATGATTCCTAATTCCTCTTCTAATGAGTTTATGCAACAACTATCTGATTATCTCATGTTTGATGATATTAGTGTTGATCACCATGATCAAGAATCTCGAACACAAAGTAATGAATCATCAGAGAAGGTAACATCACAAAGTTTTGAATCATTAGAGAAGGTAACATTCAGTGATGCTAGTCAAGGATTCAATGATGCAACCTCTAAGAACAATAATAACATaaaacaaaaaaatgggaTTAAGAGAGAAGTGGGGCAAAAGATAGCTTTTAGAACAAAATCAGAGATTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGATCGTGAAGAACAATCTCAACCTAAGGAACTACTACAAATGTTCAAGTGTGGGATGCAAAGTGAAGAAAAGAGTGGAAAGAGATAGAGATGATTCAAGCTATGTGATTACAACTTATGAAGGTGTACACAACCATGAGAGTCCATTTACCTCCTTTTGTAGCCAAATCTCCTTTCTGCATTCTGATGCATAA 588 0.3401 MDYYFVNHHHATPNFAQSNHHMIPNSSSNEFMQQLSDYLMFDDISVDHHDQESRTQSNESSEKVTSQSFESLEKVTFSDASQGFNDATSKNNNNIKQKNGIKREVGQKIAFRTKSEIEIMDDGYKWRKYGKKIVKNNLNLRNYYKCSSVGCKVKKRVERDRDDSSYVITTYEGVHNHESPFTSFCSQISFLHSDA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00731 195 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 8 181 IPR044810 GO:0003700
Tsu02g00731 195 SUPERFAMILY WRKY DNA-binding domain 112 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g00731 195 ProSiteProfiles WRKY domain profile. 115 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g00731 195 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 8 181 - -
Tsu02g00731 195 SMART WRKY_cls 120 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g00731 195 Gene3D WRKY domain 104 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g00731 195 Pfam WRKY DNA -binding domain 121 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00731 Tsu-Chr2 6160525 6162669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00731 76 179 WRKY Transcription Factor Family AT5G64810 61.111 4.87e-42 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu02g00731 WRKY 7.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00731 - - gmx:100500248 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00731 02 6160525 6162669 Tsu02g00731 02 6160525 6162669 ECH