Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00721 ATGTCTCAAATTGTTAATAACAACTTATTTGAGGAGCAAAATCAGATTCCTACACAAATGGAGTTCATCCCTTTCCCATCAAACCTAACTTTCCCTTCTTTAGGTTGTAATAATCAATCTTTGAAAGCTATAAGTTCCATAGCTTCTTCACTTACATCTGAATCAGCTGATTCTACATCAAATCTAACACAAACCCTACTCTCAAGTACCTATCCTCAAAAATCATCAAGAGAATGCTTCACTCCTAGCATTGGAGGAACTCAATTCCTATCTTTGCATAGATCAAGTGTAAATCCATGgGCAATATTGGGAGGAGTAAGTGATTGCTTCAATAATAGTGGTAAAAGAAGTGGAGTTGATCATGATCATAAATTGGGGATTTCTAgcatgaaaatgaagaaaatgaagggAAGGAAAAAAGTGAGAGAGCCTAGGTTTTGCTTCAAGACCTTGAGTACTGATGTGGATGTGTTGGATGATGGTTACAAATGGAGGAAgtatggacaaaaagttgtcaagAACACACAACACCCCAGAAGCTATTACCGTTGCACACAAGAGAATTGCCGTGTAAAGAAGCGTGTGGAGCGCTTAGCGGAGGATCCAAGGATGGTAATAACCACATATGAAGGAAGACATGGACACACTCCGTCAAATGATGATCTTCATGATTCTCAAACTCAATCTCATAATTTCTTATGGTAG 705 0.3574 MSQIVNNNLFEEQNQIPTQMEFIPFPSNLTFPSLGCNNQSLKAISSIASSLTSESADSTSNLTQTLLSSTYPQKSSRECFTPSIGGTQFLSLHRSSVNPWAILGGVSDCFNNSGKRSGVDHDHKLGISSMKMKKMKGRKKVREPRFCFKTLSTDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQENCRVKKRVERLAEDPRMVITTYEGRHGHTPSNDDLHDSQTQSHNFLW 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00721 234 Pfam WRKY DNA -binding domain 159 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g00721 234 SUPERFAMILY WRKY DNA-binding domain 153 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g00721 234 MobiDBLite consensus disorder prediction 210 234 - -
Tsu02g00721 234 Gene3D WRKY domain 144 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g00721 234 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 37 228 - -
Tsu02g00721 234 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 37 228 IPR044810 GO:0003700
Tsu02g00721 234 ProSiteProfiles WRKY domain profile. 153 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g00721 234 SMART WRKY_cls 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00721 Tsu-Chr2 6069741 6072729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00721 127 234 WRKY Transcription Factor Family AT4G39410 76.316 4.99e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu02g00721 WRKY 9.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00721 - - pvu:PHAVU_002G266400g 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00721 02 6069741 6072729 Tsu02g00721 02 6069741 6072729 ECH