Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00717 ATGAAAGCAGGGAGGTCAAAGGACAACAAAGCTGATAAGGCTTCTCGAAAATCTGGTCTAAAGATAGGGTCCAATGGAGTAAAAAATTCTtccaagaaaacaaaacaattggATCACAAAGCAAGAGGATGCAGTGAGGAATTGTTGTCTGATAAAGAGAATCAGCATTTTCCATTGAAGGAACCTGTGGGATTATGCCAAGAACATCCTAGTGATGATACATTTCTTACGAAATTGAGAGAGGTACTTGAGGTTGATCTTCATCCAGGACAAACACTCTCTTCTTCTGCGAAAATCAAGTTACAACTTTTTCCAGTAAATGAAGTAATTCGAAGAGGACTTGAAAAGGATGGGCATAATCCATACTTAGAACTCACACTAAGTGGTAGAAAGAAAATTTCTTCAGTTCTAAGACACATTGAAAAGAAGTGGGGAAGTTCAAGTATCGCCAAAGGGGAGCCCATGCTTTTTCCATACAACAGATTGAAAAATCCATCTGATCGCAGAAGGTGGACAATTAATGATAGCGACACTACAGCTGCCGCTGTGTATGCTGCTGTTGGAAACCCTGCAATTTTCCGGTTGAAGTATGGTTGGTTTAGCATACAAGAACCTACGCCATTTGGTATTTCCTCCATGCTCATTCCCCGTGGGTCGGGCGTACAATCAGGAGGAACAGAGACAGGTGGAAATGCTAATTTAGAGTCTTTATGTGATGAACGGGTCAAGACTGAGGCAACTGCAGAATACAAAGCAACTGATATGGGGAATATAACAAGTGAAATTGTGGCTCAGGAAATGGACAATGAATCTGCTGATCCTCTGGATAATGAGCCAAAAGAAAGCTGTAGCCTACAACCGCCATCAATGCAATGGGTTGATAGTTTAGACAATATAAGCATTGGTGGCCTCCTGTCTGAAGCATCATTAATGGGaaagtttgattcaaaattgTTTGGCAGCAATGCTACCAATCAAACAAGTCATTTAATTTCAGATTCATTGGATGCTTTTATCGCCTCCCGAATTAGTCATCCTCCTGTTTCAACCCCATCTGCTGGAGCCCTGCACACATCAATCTTCGATGCTGATGAAACATGTCATGGATTTGCTCTTCAAAAGTTATCTTCCCCAGCAGATGTGCAGACTACTAGTGGAACAAAAACAGATTATTCTGTGGCCAACAATCAGGGTGTATCTTCAAACTCATTGAAGCTTCCATGTACAGACAAGGTTAATGATCAAGACGGTTTTTCACAAAATCCCTTGTCCGAGAAGACTCAGACAGACTCGTTGCTTTCTTCACATTTGTTTGATGGTGAAAGAAGTCTTGGGTTAACAGGCATCAAATGgAATGACTCTTTGGGACCTTTCGATCTTGGCATGCCAGCTAAGAAATGCATTGGCGGAGACAGTatagatatcaTGGGATGTGTCAATAGCAAGTACACTCCTCCTCGAAACCGAAACAGAAACCGGAGTCGCCATGTTGATAGGTTCAAAGATCAGTATGTAAACAGTGATTCTGCACTCAAACCAATTATCATACATAACAAGAAGTATTCATCTAAACACTCAGAAGTGGAGAGTAAGAAGAGAGCTCTGACTGTGAAGACTACTACTTCAGGTGACAATACTAGAGGAGGAGAAGAAAGGGATGTTGAGAAGATACAGCGTGTTGCTAAagatattgatgatgatgataagtctgaagaggagaagaagaataaTGGTGCAAGCTATGAAGTTAAAGTGGGGGATGGTGAGTGGCCCAAATGGCTGGTTGATAATATCCCTGAAAAGCTTTTGTCTACTTTGATACGCAAGACTGCTGATTCCTATGAGAAACTAGGAAAGATAGGACGTGGAACATATAGTAATGTATATAAAGCCAAAGATAAGCAGAGTGGAAAGATTGTTGCTTTGAAGAAGGTAAGATTTGACACTTCAGATTCTGAAAGTATAAAGTTTATGGCAAGAGAGATTATGATAATACAAACGCTGGATCATCCTAATGTCATCAAACTTGAAGGACTAGCAACATCAAGGATGCAATATAGTCTTTATTTAGTCTTTGAATACATGCAATGTGACCTTACTAGAGTTATCTCCCGCCCTGGAGAAAGACTCTCTGAACCACagATCAAATGTTACATGCAGCAGCTACTTTTGGGACTCCAGCATTGTCATGAGAGGGGAGTCATGCACAGAGATATTAAAGCTTCCAATTTGTTATTAGATAAAAGTGGGGTGCTAAAAATTGCTGATTTTGGGCTTGCAAattctttaaaaattaaaccTAAAGGACCTCTTACAAATAGAGTTGTGACACTTTGGTATAGAGCTCCTGAACTTCTTTTAGGTTCAACTGATTATGATTATAGCATTGATATATGGAGTGTAGGTTGCTTATTGGGTGAGATGTTTGTTGGAAGACCAATTTTGCCTGGAAGGACAGAgATTGAACAGATTCATATGATATACAAACTTTGTGGTTCACCTCCAGaagattacttgacaaaaatgaAGCTAAAGACAAGCTTCCGTCCACCACATCGTTATAAAGCTagttttgaagaaaattttaaggattttcCTTCATCTGCCCTTAGTCTCTTGACTACCCTTCTTGATCTAGACCCCCAACATCGTGGTACTGCTGCCTCTGCCCTTGAAAGTCAATTCTTCAAATCTCTTCCATTAGCATGCGACATTTCAGAATTACCGGTAATAATCAACAAAGGTGATGATGAACGACCTCAAAGCAAGAGACGCAAAAGGCGCAAAGGCTTGAAAAAAGGGCAAATATCTAAAAGAAGTGCAAGCCATTCAAACCTGTCAGGAATGAACCAAGCTGCTGAACAATTCAAGACAAATTCAGAAGCATCAAAAGAGGAGAAGACTATAAGACTAAACATGCTAGGACCAGAGACAGGGAATAGTGGAAGCAGCagcaaatcatcatcaatatttACTAGCGAAAGGAGCATGAATGCATCTATATCCCCAGTTTTTCTCTCTAGCAGGAAAGTATCCCCTAAAACTGAAGGCCATCCTAATGCTCTTAAGAATATAAAGAACTACACACTCTTACAAGCATCTATACTTGATATGATCAACCCCAAAGAAGGCAACGATTTTGGTCAGTTTCGTAGGTCTTTCTCTACGTTGGATTTTCGGCTTGATCCAGAGAAGCTGTCAAGTCTCTACGGAGCAAGTAGTAAGTTGGACAAGGAAGTTTGA 3243 0.3864 MKAGRSKDNKADKASRKSGLKIGSNGVKNSSKKTKQLDHKARGCSEELLSDKENQHFPLKEPVGLCQEHPSDDTFLTKLREVLEVDLHPGQTLSSSAKIKLQLFPVNEVIRRGLEKDGHNPYLELTLSGRKKISSVLRHIEKKWGSSSIAKGEPMLFPYNRLKNPSDRRRWTINDSDTTAAAVYAAVGNPAIFRLKYGWFSIQEPTPFGISSMLIPRGSGVQSGGTETGGNANLESLCDERVKTEATAEYKATDMGNITSEIVAQEMDNESADPLDNEPKESCSLQPPSMQWVDSLDNISIGGLLSEASLMGKFDSKLFGSNATNQTSHLISDSLDAFIASRISHPPVSTPSAGALHTSIFDADETCHGFALQKLSSPADVQTTSGTKTDYSVANNQGVSSNSLKLPCTDKVNDQDGFSQNPLSEKTQTDSLLSSHLFDGERSLGLTGIKWNDSLGPFDLGMPAKKCIGGDSIDIMGCVNSKYTPPRNRNRNRSRHVDRFKDQYVNSDSALKPIIIHNKKYSSKHSEVESKKRALTVKTTTSGDNTRGGEERDVEKIQRVAKDIDDDDKSEEEKKNNGASYEVKVGDGEWPKWLVDNIPEKLLSTLIRKTADSYEKLGKIGRGTYSNVYKAKDKQSGKIVALKKVRFDTSDSESIKFMAREIMIIQTLDHPNVIKLEGLATSRMQYSLYLVFEYMQCDLTRVISRPGERLSEPQIKCYMQQLLLGLQHCHERGVMHRDIKASNLLLDKSGVLKIADFGLANSLKIKPKGPLTNRVVTLWYRAPELLLGSTDYDYSIDIWSVGCLLGEMFVGRPILPGRTEIEQIHMIYKLCGSPPEDYLTKMKLKTSFRPPHRYKASFEENFKDFPSSALSLLTTLLDLDPQHRGTAASALESQFFKSLPLACDISELPVIINKGDDERPQSKRRKRRKGLKKGQISKRSASHSNLSGMNQAAEQFKTNSEASKEEKTIRLNMLGPETGNSGSSSKSSSIFTSERSMNASISPVFLSSRKVSPKTEGHPNALKNIKNYTLLQASILDMINPKEGNDFGQFRRSFSTLDFRLDPEKLSSLYGASSKLDKEV 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00717 1080 PANTHER CELL DIVISION PROTEIN KINASE 558 1036 - -
Tsu02g00717 1080 MobiDBLite consensus disorder prediction 561 580 - -
Tsu02g00717 1080 MobiDBLite consensus disorder prediction 522 556 - -
Tsu02g00717 1080 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Tsu02g00717 1080 MobiDBLite consensus disorder prediction 914 950 - -
Tsu02g00717 1080 MobiDBLite consensus disorder prediction 1 17 - -
Tsu02g00717 1080 Gene3D Phosphorylase Kinase; domain 1 603 696 - -
Tsu02g00717 1080 Gene3D Transferase(Phosphotransferase) domain 1 697 935 - -
Tsu02g00717 1080 PANTHER CYCLIN-DEPENDENT KINASE 558 1036 - -
Tsu02g00717 1080 MobiDBLite consensus disorder prediction 973 994 - -
Tsu02g00717 1080 Pfam Protein kinase domain 614 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00717 1080 MobiDBLite consensus disorder prediction 974 994 - -
Tsu02g00717 1080 ProSiteProfiles Protein kinase domain profile. 614 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00717 1080 SUPERFAMILY Protein kinase-like (PK-like) 609 902 IPR011009 -
Tsu02g00717 1080 SMART serkin_6 614 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00717 1080 ProSitePatterns Protein kinases ATP-binding region signature. 620 643 IPR017441 GO:0005524
Tsu02g00717 1080 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00717 Tsu-Chr2 6028153 6036559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00717 609 954 Core Cell Cycle Gene Families AT5G10270 43.169 7.75e-91 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tsu02g00717 Pkinase 3.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00717 K08819 - gmx:102667260 703.36