Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00665 ATGGACATTGACGGTGGAAGAATTCATGCAACGATTAAGAAAACCCTCATTTACAAATTTAAGGATGATTTGGTTCAAGGAAAAGtttttagttttgaaaattTGGGTGTTTCTACAAATGGTGGTGCTTATCGCACTACTCACCATAGGTATAAGTTAAATTTTCAGTTTTCATCTGTGGTTCAGAGGCTTGCTGGCCATGATGTTGTCAAGTCTCCATTTAATTTAGTCCCTATTGCTGATGTTATTGGTGGTTCATATGACACTGATTATTTAGTCGATGTCATTGGTGTTTTGACTGGGGTTGGATCTGAACGTGAAATAACAAACCAAAATGGAACAACCACTAAGCTTAATGTGATTGCTTTGGAAGCTGATGGATATGGATGCACAAGATTCAGTGCACATTGTTTGGTCCTTATGTTGATGAACTTAACACTTTTATTGCTGCTGgatggtggtggtggaggagtCCCACCTCAGATTGCAATGTTGGTGGATAAGACGTGGTTATTCAAGGTTGAGACGAAGCCTTCAAGTAATCCTAGGTTTGAGCAAACTTTTAGAGTTAGAAAAATATGCACTGATCATGCCATAATCAAGATATTCAAGGACAGATGGGACAGGGAGGATGCTTCTATTAGCAAACATATTAATGAGGCTGGATCTTTAAGTACTTTGTTGGATAAAGGAAAGGATGTTTTAGCAAGTGCTTCTACCGATATCTTATCAGAGGATTTAATTTCATTAACTGGAAGTAGTAGCAAAGCAAAAGGAAAAGAGATTGTTAGTGGTAGTACTGCTGTTGAAGTAAGTCTGgatttgttgaacaaattttCTGATACTGTTGTCAACCTGGATGATGATTCTCTTGGTACTCAAGAGATAGAGGAAGATATTTATTCTAAGGTTTCACATTCATTGAAAGAAAAGGGCAAAGAGGTTGTTGTTGAGGGTACACCTGTTGGAAATATTGATCAAGTAATGAGAAAAGATGAAACTGTAGCAACTACTATTGCTGGTGAATCTGCCAAGACTGGTCTGTCTGTTATAACTCAAAATGAAACTGCTGCAATTCAGAAAAAGGATATTTTGGAATTGTCTGGTATTGTTGTTCTTGATAATGACTGTGTTCAAACTCAGCAAGATGATGTAACTCCAAATCAACTTGCTGCTAAGGAAACAAAAGGTTCTAGGAGCAAGAAGATAGTGAAGAGAGTCTCTCCTCAAAAGGAAGATGAGGATGAGAATGCACCAATCAAACTTTTGAAAAGGGCTATCAAAATTGAGAAGATTGTTTAG 1302 0.3594 MDIDGGRIHATIKKTLIYKFKDDLVQGKVFSFENLGVSTNGGAYRTTHHRYKLNFQFSSVVQRLAGHDVVKSPFNLVPIADVIGGSYDTDYLVDVIGVLTGVGSEREITNQNGTTTKLNVIALEADGYGCTRFSAHCLVLMLMNLTLLLLLDGGGGGVPPQIAMLVDKTWLFKVETKPSSNPRFEQTFRVRKICTDHAIIKIFKDRWDREDASISKHINEAGSLSTLLDKGKDVLASASTDILSEDLISLTGSSSKAKGKEIVSGSTAVEVSLDLLNKFSDTVVNLDDDSLGTQEIEEDIYSKVSHSLKEKGKEVVVEGTPVGNIDQVMRKDETVATTIAGESAKTGLSVITQNETAAIQKKDILELSGIVVLDNDCVQTQQDDVTPNQLAAKETKGSRSKKIVKRVSPQKEDEDENAPIKLLKRAIKIEKIV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00665 433 SUPERFAMILY Nucleic acid-binding proteins 2 63 IPR012340 -
Tsu02g00665 433 Gene3D - 68 137 IPR012340 -
Tsu02g00665 433 MobiDBLite consensus disorder prediction 388 417 - -
Tsu02g00665 433 CDD RPA1_DBD_A_like 1 61 - -
Tsu02g00665 433 Gene3D - 1 65 IPR012340 -
Tsu02g00665 433 Pfam Domain of unknown function DUF223 4 92 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00665 Tsu-Chr2 5636814 5640146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00665 2 112 Core DNA Replication Machinery Family AT5G08020 27.434 2.38e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00665 - - mtr:MTR_2g054710 177.178