Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00659 ATGATAAAAACTCTGATATTTCACACTGGTAAAGCTCCTCGTGGTGATCGAACTGATTGGGTTATGCATGAGTATAGACTTGAAGATAAGGACCTGGCTGACAGAGGAATTGTTCAGGATTCCTATGTAATCTGTAAGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAATATGGGAGGCCGTTTAATGAGGAAGACTGGAGTGATGATGAAGTTGGATTACCTTTAGCTGAATCTGCTGCACTAGTTCCCAGGTCTGCTGTGACAACAACTGATAGTTCTGTTTTAAATGACCAAAATCTTCATGCTAGTGGATATAATGGTTCAATATCCATGCCATGTCAATTAGAATCGATGCCTTCTCCCTACCCTACAAATTCCTGTCAAACAGGGTTGGTGCCTTCTCTTGATGCTGTCACATCATGTCAAACAGGATTGATGCCATCTCCCGATCCTGCGAATTCATGTCAAACGGCGTTGATACCTTCTCCCGATCCTGCGAATTTATGTCAAATGGGATGGATGCTGCCTTCTTCCAACCCTGTGAATTCATGTCAAACAGTGTTGATGCCTTCTCTCGACCCTGCAAATTCATGTCAAACAGGATCGGTGCCTTCTCTCGACCCTGCAAATTCATGTCAAACAGGATCAATGCCTTCTCCCGACCCTGCAAATTCATGTCAAACAGGATTGATGCCTGTTTCTGACCCTGCAAATCATTCATATCCCGACAATCAAGCTGTTAATAATGATGATATTTTATCAATGCTTGATATTTTCAAAGACAACGACATATTTCCTGAGGAAAATATTGCTGAAGGTGCACTTTTAGGTGACTTTTTTGAGGGTTTGGAAGACCTGGACTGTTCGGCATTGGGATCCTTTGGCCAGAATTCCGAGTTTAGCACAAATGGACTGGCTACTATGGGTGATGTTGGGCGTGACGACTTGGATTTCGTCGAGTTGACTGATCTAGACTCTGAGTTGTTCTGGCAGAGTACTACACCTGGAGGCTggagtcaaaataaataa 1041 0.4294 MIKTLIFHTGKAPRGDRTDWVMHEYRLEDKDLADRGIVQDSYVICKVFQKEGPGPRNGAQYGRPFNEEDWSDDEVGLPLAESAALVPRSAVTTTDSSVLNDQNLHASGYNGSISMPCQLESMPSPYPTNSCQTGLVPSLDAVTSCQTGLMPSPDPANSCQTALIPSPDPANLCQMGWMLPSSNPVNSCQTVLMPSLDPANSCQTGSVPSLDPANSCQTGSMPSPDPANSCQTGLMPVSDPANHSYPDNQAVNNDDILSMLDIFKDNDIFPEENIAEGALLGDFFEGLEDLDCSALGSFGQNSEFSTNGLATMGDVGRDDLDFVELTDLDSELFWQSTTPGGWSQNK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00659 346 PANTHER PLANT NAC DOMAIN PROTEIN 1 138 - -
Tsu02g00659 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 215 240 - -
Tsu02g00659 346 MobiDBLite consensus disorder prediction 200 229 - -
Tsu02g00659 346 SUPERFAMILY NAC domain 2 50 IPR036093 GO:0003677|GO:0006355
Tsu02g00659 346 PANTHER PLANT NAC DOMAIN PROTEIN 244 331 - -
Tsu02g00659 346 PANTHER PLANT NAC DOMAIN PROTEIN 215 240 - -
Tsu02g00659 346 Gene3D NAC domain 1 52 IPR036093 GO:0003677|GO:0006355
Tsu02g00659 346 ProSiteProfiles NAC domain profile. 1 50 IPR003441 GO:0003677|GO:0006355
Tsu02g00659 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 244 331 - -
Tsu02g00659 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00659 Tsu-Chr2 5566447 5569953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00659 2 133 NAC Transcription Factor Family AT5G09330 46.853 4.73e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00659 - - mtr:MTR_8g093580 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00659 02 5566447 5569953 Tsu02g00659 02 5566447 5569953 ECH