Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00650 ATGCATCATAGTGAAAATGGACAAATGTGTGCAATAAAAGAAGTCAGGATTGGCTGTGATGATCAAAATTCAAACGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTTAATCAACTTTCACATCCAAACATTGTTCAATACTATGGGAGTGAACTGGGAGAGGAGTCACTTTCTGTTTATTTGGAATTTGTCTCTGGTGGTTCTATCCATAAATTACTTCAGGAATATGGCCCGTTCAAGGAGCCTGTTATTCAAAATTACACCAGGCAGATTGTCTCTGGACTTGCTTATTTACATGCAAGAAATACAGTACACAGGGATATCAAAGGGGCCAACATACTAGTTGATCCTAATGGTGAAATCAAACTAGCAGACTTTGGAATGGCTAAACATATAACTAATGCTGCCTCAATGCTTTCATTCAAAGGAAGTCCGTACTGGATGGCACCTGAGGTTGTAATGAACGCAAATGGCTATAGCCTTGCAGTTGATATATGGAGCTTGGGATGCACACTTATTGAAATGGCAGCATCGAAGCCTCCGTGGAGTCAGTATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATTCCTGAGCATCTTTCAAATGATGCGAAGAATTTCATCATGTTATGTTTACAGCGGGACCCATCAGCTCGCCCAACAGCCCAGAAATTACTAGAGCACCCCTTCATCAGAGATCAATCAGCAACAAAAGCGGCAACCAGAGATGTTTCCTCTTACATGTTTGATGGAAGCAGAACACCGCCTGTTTTAGAGCCCCATTCCAATCGAAGAAGTATAACTTCACTTGATGGAGACTATGCAACAAAGTCAGCTATTGCAGCTCCACGTGCAATAAGGAGTCCAAGAGATCACACAAGAATGATCACATCTTTACCGGTATCACCCTCTTCAAGCCCATTGCGACAGTATGGAACGGATCATAGGAGCTGTTTCTATTCTCCTCCTCATCCATCTTACACAACATTGGGACAAAATAGTTACACTTTGAATGACCCACCCTCTTATCCAGTGAGATCAAATGCAACATTTACTCTTGATCCTTGGCATGAAACATCCAGATACAAAGCCCACACACCACCTGGTGGGTCTCCAAGAATGAGATTCATTTGA 1161 0.4195 MHHSENGQMCAIKEVRIGCDDQNSNECLKQLNQEINLLNQLSHPNIVQYYGSELGEESLSVYLEFVSGGSIHKLLQEYGPFKEPVIQNYTRQIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHITNAASMLSFKGSPYWMAPEVVMNANGYSLAVDIWSLGCTLIEMAASKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIMLCLQRDPSARPTAQKLLEHPFIRDQSATKAATRDVSSYMFDGSRTPPVLEPHSNRRSITSLDGDYATKSAIAAPRAIRSPRDHTRMITSLPVSPSSSPLRQYGTDHRSCFYSPPHPSYTTLGQNSYTLNDPPSYPVRSNATFTLDPWHETSRYKAHTPPGGSPRMRFI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00650 386 Gene3D Transferase(Phosphotransferase) domain 1 1 264 - -
Tsu02g00650 386 Pfam Protein kinase domain 2 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00650 386 SMART serkin_6 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00650 386 PANTHER MAP KINASE KINASE KINASE 4 367 - -
Tsu02g00650 386 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 367 - -
Tsu02g00650 386 ProSiteProfiles Protein kinase domain profile. 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00650 386 SUPERFAMILY Protein kinase-like (PK-like) 3 321 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00650 Tsu-Chr2 5494246 5498034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00650 3 299 MAP Kinase Kinase Kinase AT1G53570 71.000 2.04e-152 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu02g00650 Pkinase 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00650 K04421 - gmx:100787064 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00650 02 5494246 5498034 Tsu02g00650 02 5494246 5498034 ECH
Tsu02g00650 02 5494246 5498034 Tsu07g01318 07 11553039 11557322 PCT