Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00646 ATGGGTGATTTGAAAAACACAACACTAGATGAAATGGTGTGTTATTCACCAACTATGATAACAACAAATGGGATATGGCAAGGAGATAACCCTTTGGACTATGCCCTCCCTCTCTTCATCCTACAAGTTATTTTAGTCGTTATTGCCACCCGCATCTTCGTCTTCATACTCAAGCCCATTCGTCAACCACGCGTGATAGCTGAAATCTTGGGAGGGATATTATTGGGACCTTCTGTTCTCGGACGAAACAAAGCATTTGCAGAAGCTGTATTTCCATTAAGAAGTGTGATGGTGATTGAAACAATGGCTAATGTTggtcttttatattttctattctTGGTTGGAGTAGGGATGGATGCATCTTCATTACGACGCATTGGTAAAAAATCATTTACCATAGCAATTGCTGGTATGATATTACCATTTGGAACTGGAGCAGTATTTTCCGCATTATGGTTAAGAAATGATGGGGATGCTCCCCATACTGCAGCTTATATCTTACTGCTTGGTGTTATTCTTTCGGTCACTGCATTTCCTGTTCTTGCTAGGATTCTTGCTGAGCTAAAATTAATCAACACGGAGTTGGGAAGAGTTGCTCTTTCATCTGCACTTATTAATGATGTTTTATCATGGGTACTTTTGGCTATAGCAATTGCTTTGGCAGAGAATGAAACTGTATCATTGGCATCTTTTATGGTTGTATTGTCAAGTGCAGCATTTGTTGCTTTTAATGCTTTTGTTGTAAGACCAATAATCATGTGGATAATAAGGAAAACACCAGAAGGTGAATCATTCAGTGATTTCTATATATGTTTGATACTAGCAGGAGTGATGATCTCAGGTTTTATCACCGATGCTATTGGAACTCATTCTGTTTTTGGAGCttttgtgtttggtttgatCATCCCAAGTGGTCCACTTGGTTTTGCTCTTATTGAAAAGCTTGAGGACTTTGTTTCTGGTCTTCTACTTCCTCTATTTTTTGCAATTAGTGGATTAAAGACTAATCTTGGCCTCATCAGTGGTTTTTCTACATGGGCAGTTTTAATCATTCTTGTTATATTGGCTTGTATTGGCAAAGTGGCTGGAACTTTAATTGTTGCTCTTAGTTATCAAATGTCATTAACTGAAGGTGCTGCACTTGGCATGCTTATGAACACAAAAGGCCTTGTTGAAATTCTCGTTCTTAACATTGGCAGAGATCAAAAGGTTTTGGATGAAGGGTCATTTGCAACTATGGTGGTTATAACTATAATGATGACTAGTGTGATTGTACCTggaatatcaattatatatagaCCATCAAGGGGAATGATATCCTACAAAAGAAGAACAGTTCAAATGTCAAAAAAAGATTCAGAGTTTAGAGTATTAGTGTGTATTCATACCCCTAGAAATGTTCCAACAATGATCAACCTCCTTGATGCCTCTAATCCAACAAAGAAATCACCAATATGTATATATGTCCTCCATTTGGTTGAACTTACCGGTCGAACATCAGCATTACTCATTGTTCATACCTCTAGAAAATCAGACAACCCTGCTCTCAACAGATCAGAAGCTCAATCTGATCACATAATCAACGCCTTTGAAAACTACGAACAACACACCGAACATGTATCAGTCCAACCTTTAACAGCAATCTCCCCATACTCCACAATGCATGAAGATATATGCAATTTAGCTGAGGAAAAGCGTGTTGCATTTATAATCATCCCTTTTCATAAACAACAAACAGTTGACGGAGGGATGGAAGCAATGAACATGGCATTTCGAACTGTTAACCAAAATGTATTAGCGAATTCACCTTGTTCCGTTGGAATTCTAGTAGATAGAGGATTAAATAGTTCAAATCGTTTAGTTGCTGATCAAATGTCTCATCATGTagcagttttattttttggtggaCCAGATGATAGGGAAGCATTAAGTTACGGTTGGAGAATGTCAGAACATTCTGGAATAAGCCTAACTGTTATGCGTTTCGTTCCTGGAGAAgatataatgatgatgaatgataATGCCAacaatcaagagaaacaaagagtGCTGGATGTTGAAACAGATGAACATAATAATGAGAAACAACTTGATGAGAAGTTTTTGCATTGGTTTATGATGTGTCATGTAAATGACGAGTCAATTGCATATATTGAAAAAGTAGTTAATAATGGAGAGGAAACAGTTGGTGCTATAAGGTCGATGGGTGATGTCTTTGGGCTTTTTATTGTCGGGAGAGGACAAGAAAATATATCACCTCTTACGGCAGGACTCACTGATTGGAGTGAGTGTCCTGAGTTAGGAGCTATTGGTGATTTGTTAGCATCTTCTGATTTTGCAACAATTGCTTCAGTTTTGATAGTTCAACAATATGTTGGTGCTGGCTCGGAAGATGGATTGGGAACACCAGTGTTAACAAATGAAGATTATGTTAATCACCATTCATCAGTTACACCACCAAGGGGTCATCAAACTTTCAGTGGCAATCGTATAAAACAACATGAAGAAGGTGTTGTTGTTGCAGCTGAGCCAGTTGTTGCTGCAGCTGCAATTCCAGGGGAGCCAATGGATATCATTACTGCTGTACAGCTTGTGTTGAGAAAGTCACGGGCATATGGTGGTCTTGCACGAGGTCTTCATGAGAGTGCTAAAGTGATTGAGAAGCATGCCGCACAGCTCTGTGTTCTAGCTGAAGATTGTGACCAACCTGATTACGTCAAGTTGGTGAAAGCTCTTTGTGCTGAGCACAGTGTTAGCTTGTTGACTGTTCCAAATGCAAAGACCCTCGGAGAATGGGCTGGCTTGTGCAAGATTGATTCAGAAGGAAAGGCTAGGAAGGTAACCGGTTGCTCTTGCGTGGTTGTCAAGGATTTTGGTGAGGAACACGAAGCATATAATGTGGTTCTTCAGCATGTGAAATCTAACTAA 2928 0.3794 MGDLKNTTLDEMVCYSPTMITTNGIWQGDNPLDYALPLFILQVILVVIATRIFVFILKPIRQPRVIAEILGGILLGPSVLGRNKAFAEAVFPLRSVMVIETMANVGLLYFLFLVGVGMDASSLRRIGKKSFTIAIAGMILPFGTGAVFSALWLRNDGDAPHTAAYILLLGVILSVTAFPVLARILAELKLINTELGRVALSSALINDVLSWVLLAIAIALAENETVSLASFMVVLSSAAFVAFNAFVVRPIIMWIIRKTPEGESFSDFYICLILAGVMISGFITDAIGTHSVFGAFVFGLIIPSGPLGFALIEKLEDFVSGLLLPLFFAISGLKTNLGLISGFSTWAVLIILVILACIGKVAGTLIVALSYQMSLTEGAALGMLMNTKGLVEILVLNIGRDQKVLDEGSFATMVVITIMMTSVIVPGISIIYRPSRGMISYKRRTVQMSKKDSEFRVLVCIHTPRNVPTMINLLDASNPTKKSPICIYVLHLVELTGRTSALLIVHTSRKSDNPALNRSEAQSDHIINAFENYEQHTEHVSVQPLTAISPYSTMHEDICNLAEEKRVAFIIIPFHKQQTVDGGMEAMNMAFRTVNQNVLANSPCSVGILVDRGLNSSNRLVADQMSHHVAVLFFGGPDDREALSYGWRMSEHSGISLTVMRFVPGEDIMMMNDNANNQEKQRVLDVETDEHNNEKQLDEKFLHWFMMCHVNDESIAYIEKVVNNGEETVGAIRSMGDVFGLFIVGRGQENISPLTAGLTDWSECPELGAIGDLLASSDFATIASVLIVQQYVGAGSEDGLGTPVLTNEDYVNHHSSVTPPRGHQTFSGNRIKQHEEGVVVAAEPVVAAAAIPGEPMDIITAVQLVLRKSRAYGGLARGLHESAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHSVSLLTVPNAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKSN 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00646 975 SUPERFAMILY L30e-like 855 973 IPR029064 -
Tsu02g00646 975 Gene3D - 843 975 IPR029064 -
Tsu02g00646 975 Gene3D - 480 729 - -
Tsu02g00646 975 PRINTS Ribosomal protein S12E family signature 920 941 IPR000530 GO:0003735|GO:0005840|GO:0006412
Tsu02g00646 975 PRINTS Ribosomal protein S12E family signature 945 958 IPR000530 GO:0003735|GO:0005840|GO:0006412
Tsu02g00646 975 PRINTS Ribosomal protein S12E family signature 865 878 IPR000530 GO:0003735|GO:0005840|GO:0006412
Tsu02g00646 975 PRINTS Ribosomal protein S12E family signature 879 895 IPR000530 GO:0003735|GO:0005840|GO:0006412
Tsu02g00646 975 PANTHER CATION/H+ EXCHANGER 3 8 821 - -
Tsu02g00646 975 PANTHER CATION/H + ANTIPORTER 8 821 - -
Tsu02g00646 975 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 861 954 IPR004038 -
Tsu02g00646 975 Pfam Sodium/hydrogen exchanger family 45 429 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu02g00646 975 Gene3D - 38 435 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00646 Tsu-Chr2 5473323 5478585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00646 7 813 Antiporter Super Family AT2G13620 66.626 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00646 - - adu:107480185 1149.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00646 02 5473323 5478585 Tsu02g00646 02 5473323 5478585 ECH