Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00614 ATGCAAAGTGGATTAGAGTTCCCACCTGGGTTTAGATTTCATCCTACTGATGATGAGCTTGTGAATCACTACTTGTGTAGAAAGTGTGCTTCACTACCTATTGCTGTTCCTATTATCAAAGAAATTGATTTGTATAAGTTTGATCCATGGCACCTTCCAGaAATGGCTCTTTATGGTGAGAAAGAATGGTATTTTTTCTCTCCAAGGGACAGAAAATATCCAAACGGTTCACGACCGAACCGGGCTGCGGGAACCGGATATTGGAAAGCTACCGGAGCTGATAAGCCGATTGGTAAGCCGAAGCCGCTTGGGATAAAGAAAGCACTTGTGTTCTATGCTGGTAAAGCTCCCAAGGGTGTTAAAACTAATTGGATCATGCACGAATATCGTCTTGCAAATGTCGATAGAACCGCATCGAAAAATAATCACAACTTAAGACTTGATGATTGGGTGTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAATGACACAAAACCTATAATGTTTTCTAAGGAAGTTGAATTTGAGAATGAGACGAAGCCGAAGATTGAAATGAATGGCCAAGATGATTTCAGGATAATTAATGATCAATTATATATTGACACGTCAGATTCAGTGCCACAGTTTCACACGGACTCAAGTTGTTCTGAGCACGTGGTTTCGCCGGATGTCATGTACGATAAAGAGGTCCAAAGCGAGCCCAAATGGAATGAATTTGTTCTTGGCCCAGATCCAGTTTCAgcttttgattttcaattgaattttatgGATGATGGTGAAGATGACTATTTTACCCCTCAGGTTCAGTACCAAATGAATAATTGGCAAGATATGTTTATGTACCCACCTAAGTAA 867 0.3922 MQSGLEFPPGFRFHPTDDELVNHYLCRKCASLPIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKPLGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRTASKNNHNLRLDDWVLCRIYNKKGKIEKYNDTKPIMFSKEVEFENETKPKIEMNGQDDFRIINDQLYIDTSDSVPQFHTDSSCSEHVVSPDVMYDKEVQSEPKWNEFVLGPDPVSAFDFQLNFMDDGEDDYFTPQVQYQMNNWQDMFMYPPK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00614 288 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 4 274 - -
Tsu02g00614 288 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Tsu02g00614 288 Gene3D NAC domain 16 164 IPR036093 GO:0003677|GO:0006355
Tsu02g00614 288 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Tsu02g00614 288 PANTHER NAC TRANSCRIPTION FACTOR 56 4 274 - -
Tsu02g00614 288 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00614 Tsu-Chr2 5169474 5171280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00614 1 285 NAC Transcription Factor Family AT1G01720 64.014 2.77e-125 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu02g00614 NAM 1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00614 - - gmx:100170751 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00614 02 5169474 5171280 Tsu02g00614 02 5169474 5171280 ECH
Tsu02g00614 02 5169474 5171280 Tsu07g01264 07 11044060 11045814 ECH