Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00610 ATGTCTCTGCTTCCAAACAGTTCCACTGATGGCATTAACTTTGATGGTACTGAAAACTTTCAAAAGTTTTATGAGTGTTGGATGGTTGAGCAAAACCAATATCTGAATGAACTTGTAGCAGCTAAATCAGCTCAAATTCAGCTCACAAACGACAGAATGCATGCATTGGTTGATAAGGTGATTGAGCATTATGAGCATTACTACAAGGCAAAGTCAATTTATGCAAAGAAAGATGTTTTGTCCATATTTTCACCACCATGGTTAAGCTCTTTAGAAGTAGCTTTTCTTTGGATTGGTGGATGGAGACCAAGCATGGCATTTCATTTGTTATATTCAAAATGCAGTATGCAATTTCAAGCAAGGTTGAATGACCTTATTCAAGGACAAAAAACATGTGACCTTGGGGATCTCTCGGCGTCTCAACTCGCTGAGTTCGACCATTTGCAAAAGAGGACTATTAGGGAAGAGAGGGAAATCGCTGATATGATAGCCGAGCATCAGGAGACGATGGCCGATGCTCCGATGGTGGAGTTGTCTCATGTGTTTTCTGAGATGATCAGAGGAGGAGAgaatgagaagaaagaattggaAGAGAGGATTGAATCAGCTCTTGAACCTAAGATGGAGGGTTTGGAGAAAATTTTGCATAGAGCTGATGATTTAAGACTGAGAGCATTGcagggcattgttaatattCTGACTCCAAAACAAGCAATTTACTTCTTGATTGCTGCTGCAGAACTTCACCTGAGGCTGCATGAGTGGGGTAAAAAGAAGGATGATGCTAAAAGAGGCCAACAAGGTATTATGGAGGGTGAAAGGCATCATAATTCCTGA 837 0.3919 MSLLPNSSTDGINFDGTENFQKFYECWMVEQNQYLNELVAAKSAQIQLTNDRMHALVDKVIEHYEHYYKAKSIYAKKDVLSIFSPPWLSSLEVAFLWIGGWRPSMAFHLLYSKCSMQFQARLNDLIQGQKTCDLGDLSASQLAEFDHLQKRTIREEREIADMIAEHQETMADAPMVELSHVFSEMIRGGENEKKELEERIESALEPKMEGLEKILHRADDLRLRALQGIVNILTPKQAIYFLIAAAELHLRLHEWGKKKDDAKRGQQGIMEGERHHNS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00610 278 Pfam Seed dormancy control 35 112 IPR025422 GO:0006351|GO:0043565
Tsu02g00610 278 ProSiteProfiles DOG1 domain profile. 17 262 IPR025422 GO:0006351|GO:0043565
Tsu02g00610 278 PANTHER OS01G0159000 PROTEIN 16 266 - -
Tsu02g00610 278 PANTHER - 16 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00610 Tsu-Chr2 5142465 5143301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00610 9 252 Calmodulin-binding Proteins AT5G65210 27.600 2.14e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00610 - - cam:101504084 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00610 02 5142465 5143301 Tsu02g00610 02 5142465 5143301 ECH