Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00602 ATGTTGAAGTCCTTAACATTACTTAGTACTATCATGTTGGTGATTGTTGCAATTACAATCCCTACACAATGTCAAAAAATTGATCGGAGTCCTACAAAAACAACTGTGCGTGTTTCAAATGATATGGGCACCAATGTTAATATGCATTGTAAATCATCAGACGATGATCTTGGCAGCCATGTTCTTGCACAAGGTCAATATACAGAATGGTCTTTCCGCTCCAACATTCGCGGTACCACTCTATTTTCTTGTGTCTTCAATTGGAGCGGTGTGACAAAGAATGTCGTAATTTATGATGCTAAGAAGGATGAAGATGTATGTATTACCAAATGTTGGCGAGTTCTTAGGACTGATGGagcttatttttataatcaGTACAAAGGCTCTTGGGATAAAAGATATGAATGGTAA 411 0.365 MLKSLTLLSTIMLVIVAITIPTQCQKIDRSPTKTTVRVSNDMGTNVNMHCKSSDDDLGSHVLAQGQYTEWSFRSNIRGTTLFSCVFNWSGVTKNVVIYDAKKDEDVCITKCWRVLRTDGAYFYNQYKGSWDKRYEW 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00602 136 Pfam Plant self-incompatibility protein S1 35 136 IPR010264 -
Tsu02g00602 136 PANTHER PLANT SELF-INCOMPATIBILITY PROTEIN S1 FAMILY 15 128 - -
Tsu02g00602 136 PANTHER - 15 128 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00602 Tsu-Chr2 5081802 5082212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00602 14 136 Carbohydrate Esterase AT3G16970 31.111 6.04e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00602 - - mtr:MTR_8g094810 219.164