Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00601 ATGGCTAGAGTAAGGAGCATAGTGGAGGAGGAAGAGAAGGGAAAATTAGTATCAACCATGATTGGGGGGTATAGGCGAAAGGCTATTGTAACATTAGTCAAGACTTGGATGGTAGTATCGGCCGAAACCGGTGAAGCACGCGTTGAGGATGTCGACAAACACAGCATTATGCGACGAACAGGGTTACCGGCGCGCGACCTTAGAGCACTAGATCCACATCTTTCTAATCCTTCTTCTATCTTAGGACGAGAAAGAGCCATTGTTGTTAATTTAGAACATATTAAAGCCATCATCACTTCTACCGAAGTGCTTATGATTAATTCCTCTAACCCTTTCTTTCTTCGCTTTCTTCAAGATCTTCAGGCTCGTGTTCCGCCTTCTGATGATGTTAAAACACGGAAACAGATTAGTAATGACGCTGTGGATAGTGATTGTGAAAAGAAACCTTTGTTGGATGAAAAGACGCACGAAGATTCTTCAAACAATGTGGCCGCGGCTCCTAAGCCGTTACCTTTTGAGTTCAAAGCGCTTGAGGCGTGTATTGAATCCGCTTGCACATGCCTTGAATACGAGACTCAAAAATTGGAAGAGGAGGCTTACCCAGCTTTGGATGAATTGACCGCAGAAATTTCTACTCTCAATCTCGAACATGTAAGGCAGATCAAGAATCGTTTGGTTGCACTTTCTGGTCGTGTGCAGAAGGTAGCAGATCAACTCGAACATTTGTTGGATGATGATTATGACATGGCTGAAATGTACTTGACACAAAAACTCGATGATGGCTTATTGGATCAAACATCATTAAAAGAAGGATACAATTCAACATATGATGAAAATATAAACGAAAGGGATGAATCAGATTCGGACGACAAATCCTATGATTCTAAGCCTGATGTTGAGGAATTGGAGATGCTTTTAGAAGCATATTTTGCACAAATAAATGGCATCTTGCAAAAATTGTTAAGTATGAGTGAGTATGTGGGAGATACAGAAGACTACATCAATATAATGTTAGATGATAAGAGAAATGAGCTTCTACAAGTAGCAATAACATTCAGCACAATGAATGTGATAATCAGTGCAGGTATTGTGGTTGTAGGATTGTTTGGCATGAATGTTCACATTGATCTCTTTGATGGAGACCCTGATTATCGTTTTTGGACCTGTGTTGGTGGCACTGTTGGGGGCTGTATATTGTTAACACTAGTTTATATTTGGTGGGGTAAACAAAGATATTTGATCTTTGACTAA 1251 0.4029 MARVRSIVEEEEKGKLVSTMIGGYRRKAIVTLVKTWMVVSAETGEARVEDVDKHSIMRRTGLPARDLRALDPHLSNPSSILGRERAIVVNLEHIKAIITSTEVLMINSSNPFFLRFLQDLQARVPPSDDVKTRKQISNDAVDSDCEKKPLLDEKTHEDSSNNVAAAPKPLPFEFKALEACIESACTCLEYETQKLEEEAYPALDELTAEISTLNLEHVRQIKNRLVALSGRVQKVADQLEHLLDDDYDMAEMYLTQKLDDGLLDQTSLKEGYNSTYDENINERDESDSDDKSYDSKPDVEELEMLLEAYFAQINGILQKLLSMSEYVGDTEDYINIMLDDKRNELLQVAITFSTMNVIISAGIVVVGLFGMNVHIDLFDGDPDYRFWTCVGGTVGGCILLTLVYIWWGKQRYLIFD 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00601 416 PANTHER MAGNESIUM TRANSPORTER MRS2-F 22 414 - -
Tsu02g00601 416 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 22 414 IPR039204 -
Tsu02g00601 416 Gene3D Magnesium transport protein CorA, transmembrane region 115 345 - -
Tsu02g00601 416 MobiDBLite consensus disorder prediction 276 296 - -
Tsu02g00601 416 Gene3D - 27 109 - -
Tsu02g00601 416 CDD Mrs2_Mfm1p-like 36 407 IPR039204 -
Tsu02g00601 416 MobiDBLite consensus disorder prediction 273 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00601 Tsu-Chr2 5079189 5081307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00601 35 414 MRS2 Gene Family AT3G19640 45.682 7.38e-119 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00601 - K16075 gmx:100808805 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00601 02 5079189 5081307 Tsu02g00601 02 5079189 5081307 ECH