Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00599 ATGAAGGTGAAGAAGGGTTGGTTAGCTGTTCAAGTTGGTTCAGAGGAAGAACTGTCTCAAGAGGGTGGTGTAGATGATTCACAAAGATTTGTGATTCCTATTTCTTATCTTTATCATCCTCTTTTCAAACGACTTCTTGACAAAGCTTATGAGATTTATGGCTACAACACTGATGGTCCTCTTAAACTACCATGTTCTGTTGATGACTTTGTTCATCTTAGATGGCGAATTGAAAAAGAATCCACTCCCTACAACCACCATCACCatcacaatcatcatcatcatcatcttcatattCTTCCTCATGCTTTGTCTTTCAATTCTTGTTAA 330 0.3485 MKVKKGWLAVQVGSEEELSQEGGVDDSQRFVIPISYLYHPLFKRLLDKAYEIYGYNTDGPLKLPCSVDDFVHLRWRIEKESTPYNHHHHHNHHHHHLHILPHALSFNSC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00599 109 PANTHER SMALL AUXIN-UP RNA-RELATED 1 94 - -
Tsu02g00599 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 94 IPR003676 GO:0009733
Tsu02g00599 109 Pfam Auxin responsive protein 3 76 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00599 Tsu-Chr2 5045674 5046003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00599 3 78 Calmodulin-binding Proteins AT3G43120 44.737 2.85e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00599 K14488 - mtr:MTR_3g097120 152.91