Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00598 ATGTTGCCCCCAAATTGTAGGAGGTCTCCTCTGAAAATATTGATGAGGTGGTTCATATTCCTTGTTGTCTTGAAACTCAGTTTTGCAATCAAAGATCCTGACATAGAAGGTGAAGCTCTGCTTGATCTTTTGAATTACCTCAATGATTCcaataatcaaataaatgatTGGGATAGTCATTTAGTGAGCCCTTGTTTCAGTTGGTCACATGTAACTTGTAAAAATGGACATGTCATATCTCTGACCCTGGCTTCCATTGGATTTACTGGAACACTTTCTCCTTCAATTACCAGATTGAAATATTTGGTTAACTTGGAATTGCAGAACAACAATATTTCCGGCCCTTTACCTGATTACATTGCCAACTTGACATACCTACAATATCTAAATCTTGCTAACAATAATTTTAATGGTTCTATACCACTTATATGGAGTCAACTATCCAATCTCAAGAATGTGGATCTTTCATCTAATGGTCTTACTGGAACTATCCCAACACAGCTCTTTTCAGTTCCAATGTTTAACTTTTCAGATACGCGTCTTGGTTGCGGCTCTAGCTTCAAGCAACCTTGTGTTTCTAAATCTGATCATCCAGTttcaaccaaaaaatcaaaagtggCAAAAGCCGTGCGTTATGCAAGTTATGGTGCATTCGCACTTCTGATTCTTGGTGCCATCTTTACATATAGACACTATCAAAAGCAAAGACTCAAAAGTGatgtttttgttgatgttttagGTGAAGATGAGAGCAAAATTTCTTTTGGGCAACTAAGAAAGTTTTCTTTGCGCGAACTCCAACTTGCAACTAAAAATTTCAGTGAAAGCAATGTAATTGGTCAAGGTGGTTTTGGAAAAGTCTACAGAGGACTACTCTCAGATAACACAAAAGTTGCTGTGAAACGCCTCACCGATTATCATAATCCTGGTGGTGAGGCTGCGTTCGAGAGAGAAGTTCATCTCATTAGTGTCGCAGTTCATAGAAACCTCCTAAGACTAATTGGGTTCTGCACAACCTCAACTGAAAGAATCCTTGTATATCCTTTCATGGAAAATTTAAGCGTAGCATATCGATTAAGAGATTTGAAATCTGATGACAAAGGCTTGGATTGGCCAACAAGGAAGCGTGTGGCTTTCGGTACAGCACACGGTTTGGAATATCTACACGAGCAATGCAATCCGAAGATAATTCACCGTGATCTAAAGGCAGCGAATATCCTTTTAGATGATGAGTTTGAACCTGTTCTAGGTGATTTTGGACTAGCCAAGCTGGTCGATGTAAGGATGAGTCATGTTACTACTCAAGTGCGCGGTACAATGGGCCACATTGCCCCGGAATATTTGTCAACCGGAAAATCATCAGAAAAGACAGATGTTTTTGGATATGGCATAACACTTCTAGAACTTATCACAGGTCAGCGCGCAATTGACCTCTCTCGGCttgaagaagaggaagatgTTCTTCTCATTGATCATGTAAAAAATCTACTAAGAGAAAATAGAGTGGAGGACATAGTGGACAACAATTTGGAGACTTTTGATCCCAAAGAAGTTGAAACCATTCTTCAAGTCGCCTTACTTTGCACACAAGCCTATCCAGAGGATCGTCCGACAATGTCAGAAGTGGTAAAAATGTTGCTTGGAGTCGGATTAGCGGATAGATGGGCCGACTGGAAACAACTTGAAGAAACTAGAAATGAAGAAATAGAATTATCACTCATGACTCACCAATTTCCTTGGAGTGATGAATCTACTCTGGATCAAGAAGCTATACAACTTTCAAGAGCAAGATAG 1794 0.3824 MLPPNCRRSPLKILMRWFIFLVVLKLSFAIKDPDIEGEALLDLLNYLNDSNNQINDWDSHLVSPCFSWSHVTCKNGHVISLTLASIGFTGTLSPSITRLKYLVNLELQNNNISGPLPDYIANLTYLQYLNLANNNFNGSIPLIWSQLSNLKNVDLSSNGLTGTIPTQLFSVPMFNFSDTRLGCGSSFKQPCVSKSDHPVSTKKSKVAKAVRYASYGAFALLILGAIFTYRHYQKQRLKSDVFVDVLGEDESKISFGQLRKFSLRELQLATKNFSESNVIGQGGFGKVYRGLLSDNTKVAVKRLTDYHNPGGEAAFEREVHLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKSDDKGLDWPTRKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEPVLGDFGLAKLVDVRMSHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELITGQRAIDLSRLEEEEDVLLIDHVKNLLRENRVEDIVDNNLETFDPKEVETILQVALLCTQAYPEDRPTMSEVVKMLLGVGLADRWADWKQLEETRNEEIELSLMTHQFPWSDESTLDQEAIQLSRAR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00598 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Tsu02g00598 597 ProSiteProfiles Protein kinase domain profile. 273 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00598 597 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 597 - -
Tsu02g00598 597 SUPERFAMILY L domain-like 37 172 - -
Tsu02g00598 597 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Tsu02g00598 597 SMART serkin_6 273 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00598 597 SUPERFAMILY Protein kinase-like (PK-like) 252 546 IPR011009 -
Tsu02g00598 597 Pfam Protein kinase domain 274 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00598 597 Gene3D Phosphorylase Kinase; domain 1 242 349 - -
Tsu02g00598 597 Gene3D Ribonuclease Inhibitor 33 195 IPR032675 -
Tsu02g00598 597 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Tsu02g00598 597 Gene3D Transferase(Phosphotransferase) domain 1 350 565 - -
Tsu02g00598 597 PANTHER LRR RECEPTOR-LIKE KINASE 13 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00598 Tsu-Chr2 5027775 5032165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00598 33 592 Receptor kinase-like Gene Family AT5G65240 56.633 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Tsu02g00598 Pkinase 6.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00598 - - gmx:100800886 995.342