Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00594 ATGGCTGCTAATAACACTTTTCCTTCAGCATATGCAACAAGTGCATCAGTACCAGATTGGTTAAACAAAGGAGATAACACATGGCAAATGGTAGCCGCAACCCTTGTCGGAATCCAAAGTATGCCGGGACTAGTTATCCTATACGGCAGCATAGtgaaaaagaaatgggcagtaAACTCTGCTTTCATGGCTCTCTATGCTTTTGCAGCAGTTATAATCTGTTGGGTTACATGGGCTTATAAGATGTCATTTGGTGAAAAACTTTTACCCTTTTGGGGTAAAGCCGGGCCTGCGTTGGGTCAGAAATTTCTAATCAACCAGGCCGGGCTACCCGCAACGATCCATCATTATAATAATGGACAAGTAGAAACTGGTGAGATTACACCATATTATCCAATGGCTACTATGGTTTGGTTTCAGTGTGTTTTTGCTGCAATTGCATTAGTTATATTGGCTGGTTCTGTTTTGGCTAGAATGAGTTTTAAGGCATGGATGATGTTTGTGCCACTTTggttaactttttcttatactGTTGGTGCTTTTAGTTTATGGGGTGGTGGATTCTTGTTTCAATGGGGTGTTATGGATTATTCCGGTGGTTATGTTATTCATCTTTCTTCTGGGATTGCTGGTTTCACTGCTGCTTATTGGGTTGGGCCTAGATCAAAGAAAGACAGAGAAAGATTCCCACCAAACAATGTGTTACTAACATTGGCAGGGGCAGGGTTACTATGGTTGGGATGGGCAGGTTTCAATGGTGGAGATCCTTATTCAGCTAACACTGATTCCTCCATGGCTGTTCTCAACACAAACATTTGTGCTGCCACAAGTCTTCTAGTATGGACATGGCTTGATGTCATATTCTTTAAGAAACCGTCGGTTATCGGAGCTGTTCAGGGCATGATCACCGGTCTTGTTTGCATCACTCCCGGTGCCGGTCTTGTTCAAGGATGGGCTGCCATAATAATGGGCATACTATCAGGAAGTGTTCCATGGTACACAATGATGGtacttggaaaaaaatttacaatatttCAAAAGGTTGACGACACCCTCGCCGTGTTCCACACTCACGCCGTGGCTGGCATTCTAGGAGGTGTACTAACCGGCCTATTCGCCGAGCCAACTCTAAGTACTCTCTTTCTCCCCGTTACCAATTCCAAAGGAGGTGTCTATGGAGGCTCCGGCGGAGTCCAAATCCTTAAACAAATAGTTGGAGCTTTATTCATCATTGGATGGAACATTGTTGCCacttcaattatttgtttagttGTAGGTCTCATTGTTCCTTTGAGAATGACTGAGGAAGAATTGCTTATTGGAGATGATGCGGTTCATGGGGAAGAAGCTTATGCTTTGTGGGGTGATGGTGAGAAACTTAGCCTCTACAAAGATGATACTACAAGTCATGGagttttggcatcaagtggtgCCACTCAAGTTGTCTAG 1449 0.4134 MAANNTFPSAYATSASVPDWLNKGDNTWQMVAATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVIICWVTWAYKMSFGEKLLPFWGKAGPALGQKFLINQAGLPATIHHYNNGQVETGEITPYYPMATMVWFQCVFAAIALVILAGSVLARMSFKAWMMFVPLWLTFSYTVGAFSLWGGGFLFQWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYSANTDSSMAVLNTNICAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAIIMGILSGSVPWYTMMVLGKKFTIFQKVDDTLAVFHTHAVAGILGGVLTGLFAEPTLSTLFLPVTNSKGGVYGGSGGVQILKQIVGALFIIGWNIVATSIICLVVGLIVPLRMTEEELLIGDDAVHGEEAYALWGDGEKLSLYKDDTTSHGVLASSGATQVV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00594 482 Gene3D Ammonium transporter AmtB like domains 2 454 IPR029020 -
Tsu02g00594 482 SUPERFAMILY Ammonium transporter 20 433 - -
Tsu02g00594 482 TIGRFAM amt: ammonium transporter 25 451 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tsu02g00594 482 Pfam Ammonium Transporter Family 28 451 IPR024041 GO:0008519|GO:0016020|GO:0072488
Tsu02g00594 482 PANTHER AMMONIUM TRANSPORTER MEP2 4 465 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tsu02g00594 482 ProSitePatterns Ammonium transporters signature. 196 221 IPR018047 GO:0008519|GO:0016020|GO:0072488
Tsu02g00594 482 PANTHER AMMONIUM TRANSPORTER 4 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00594 Tsu-Chr2 5004641 5008188 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00594 133 470 Inorganic Solute Cotransporters AT2G38290 70.414 2.50e-168 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00594 K03320 - gmx:100785993 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00594 02 5004641 5008188 Tsu02g00594 02 5004641 5008188 ECH