Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00581 ATGGAAAGGTACGAGGTTGTTAAGGATTTGGGAGCTGGGAATTTTGGAGTTGCTAGGCTTTTGAGGAACAAGGAGACTAAGGAACTTGTTGCTATGAAATACATCGAGCGTGGCCATAAGATTGATGAGAATGTGGCAAGAGAGATTATCAACCACAGGTCCCTTCGGCACCCGAATATAATTCGTTTCAAGGAGGTGGTTTTGACCCCTACTCATTTAGCAATAGTAATGGAGTATGCAGCTGGAGGAGAACTCTTCGAGAGGATCTGTAATGCTGGCCGGTTTAGTGAAGATGAGGCTAGATATTTCTTTCAGCAGCTGATATCTGGTGTCCATTACTGTCATGCTATGCAAATATGTCATAGAGATTTGAAGCTGGAAAATACACTTTTAGATGGAAGCCCTGCACCTCGCTTGAAAATTTGTGACTTCGGTTATTCCAAGTCATCTTTGCTTCATTCACGACCCAAATCAACTGTTGGAACTCCGGCTTATATAGCACCGGAGGTTCTTTCTAGGAGGGAGTATGACGGCAAGTTGGCCGATGTATGGTCCTGCGGAGTGACCCTTTATGTTATGCTGGTTGGAGCATATCCCTTTGAGGATCAGGATGACCCTAGAAATTTTAGGAAAACAATTCAGCGCATAATGGCTATTCAATACAAAATCCCTGATTATGTTCACATATCTCAAGATTGCAAACACCTCCTATCTCGTATATTTGTTGCAAATCCATTAAAGAGAATTTCTCTCAAGGAAATCAAGAACCATCCATGGTTTTTAAAGAATCTTCCAAGGGAGCTAACTGAATCAGCTCAAGCTGCCTATTACCAGAGAGGCAATCCAAGCTTTTCTATTCAAAGTGTGGACGAGATAATGAAAATTGTGGGAGAGGCGAGAGATCCTCCTCCAGTTTCTAGGCCCGTCAAAGGCTTCGGCTGGGAaggtgaagaagaagaggaagatgtGGAAGAAGAGGTGgaggaagaggaagatgaagaagatgagtaTGACAAGAGGGTCAAAGAGGTTCATGCAAGTGGAGAATTTCAGATCATGGTGGCTACCCTATATTCCCAATTTGTGGGAATTAGTAACAGAAGAACAAGTTATTGGTGA 1119 0.4093 MERYEVVKDLGAGNFGVARLLRNKETKELVAMKYIERGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAIQYKIPDYVHISQDCKHLLSRIFVANPLKRISLKEIKNHPWFLKNLPRELTESAQAAYYQRGNPSFSIQSVDEIMKIVGEARDPPPVSRPVKGFGWEGEEEEEDVEEEVEEEEDEEDEYDKRVKEVHASGEFQIMVATLYSQFVGISNRRTSYW 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00581 372 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Tsu02g00581 372 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00581 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Tsu02g00581 372 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Tsu02g00581 372 PANTHER SERINE/THREONINE KINASE 2 348 - -
Tsu02g00581 372 MobiDBLite consensus disorder prediction 315 337 - -
Tsu02g00581 372 Coils Coil 316 347 - -
Tsu02g00581 372 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Tsu02g00581 372 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00581 372 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00581 372 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 348 - -
Tsu02g00581 372 SUPERFAMILY Protein kinase-like (PK-like) 1 289 IPR011009 -
Tsu02g00581 372 CDD STKc_SnRK2 3 259 - -
Tsu02g00581 372 MobiDBLite consensus disorder prediction 304 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00581 Tsu-Chr2 4900103 4905033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00581 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 41.912 1.77e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tsu02g00581 Pkinase 1.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00581 K14498 - gmx:547968 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00581 02 4900103 4905033 Tsu02g00581 02 4900103 4905033 ECH
Tsu02g00581 02 4900103 4905033 Tsu07g01242 07 10785513 10789434 PCT