Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00551 ATGTCTGAGATGTGTGAACCAAATTCAGAGAAAGTTTGTGAAACTATTGCTGAACCAATATCAGAGAAAGTCTGTGAAATTGTTGCTGAACCAAATTCAGAGAAAGTTTGTGAAACTAGTGGTGAGTCTCCAACAACACTAGTTGTAAAACAACCAGAAGAAGCTGAACCAAAAAGTAGTGAAAGAATCAAAGCTACAAGACATCCTAGATGGACAAGACAAGAAACACTTGTTCTAATTGAGGCAAAGAAAGTGATTGAAAATGGAGATCAAGTTTGCAGATACAGATCATCAACATCAGGGTTGGTTCAAACCGATCCGAAATGGGATTTAGTGTCATCATTGTGTCAACAACATGGTGTCAAACGAGGAGCTGTTCAGTGTAGGAAAAGATGGGGAAATCTTCTAACTGATTTCAGGAAGATCAAGAAATGGGAGACAAATGCTAAAAATGAGTCTGAATCTTTTTGGATAATGAGAAATGATGTTAGGAAAGAAAATAAGTTGCCTGGTTTCTTTGATGCTGTTGTGTACAATGTATTGGATGGAGGGGTTTGCACTGCTGCTGCATTTCCACTGACACTGATTAAAACGATGCCGAGAGCAGCAGAGAATGGTGATCAAGTTGAAGGTGTGGCGGCGATAGAGCAAGGTAATAAAGAGGATGAAATTGAGGAGGATGAGGATGAGGCTATTGTTGATAGTGAGAAAATGGGTTGGAGCACTGAGGAGGAAAACATGGATACAAACACCAATGGAAATATGGTTAACAGTCCATTCAAAACACCAAGTGCTAAGAAAACCAGCATTGGAGGAGGGACTCTGAAATTGACACCAATCATACTGCCTAGTTCAACAGCAGAGAGACAGCAACAACCATTTTTCCAAGGGAACTACGATCCAGGGTGTCAGAGAGAAGCTTTGTTCAATGAGGGGTACAAAAGAAAGCGACTATCCCCGGGTTATTCTGAAGAGACCACAGATTTTAATGACGATGTCATCAAAGTGCTAAGAAGGAACAGTAACATACTGAAAGCTCACCTTGGAGCTCAGAACATCAATTCCCAATTGGCCAGAGACCAGCAGAAGCAGCATACAGATAGCTTAGTTTCAGCCCTTGGAAGGCTTACAGATGCTATCACAAAAATTGCAGACAAGATGTAA 1164 0.4081 MSEMCEPNSEKVCETIAEPISEKVCEIVAEPNSEKVCETSGESPTTLVVKQPEEAEPKSSERIKATRHPRWTRQETLVLIEAKKVIENGDQVCRYRSSTSGLVQTDPKWDLVSSLCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWETNAKNESESFWIMRNDVRKENKLPGFFDAVVYNVLDGGVCTAAAFPLTLIKTMPRAAENGDQVEGVAAIEQGNKEDEIEEDEDEAIVDSEKMGWSTEEENMDTNTNGNMVNSPFKTPSAKKTSIGGGTLKLTPIILPSSTAERQQQPFFQGNYDPGCQREALFNEGYKRKRLSPGYSEETTDFNDDVIKVLRRNSNILKAHLGAQNINSQLARDQQKQHTDSLVSALGRLTDAITKIADKM 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00551 387 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 52 387 - -
Tsu02g00551 387 MobiDBLite consensus disorder prediction 247 269 - -
Tsu02g00551 387 Pfam Myb/SANT-like DNA-binding domain 69 159 IPR044822 -
Tsu02g00551 387 Gene3D - 71 141 - -
Tsu02g00551 387 ProSiteProfiles Myb-like domain profile. 70 136 IPR001005 -
Tsu02g00551 387 MobiDBLite consensus disorder prediction 36 65 - -
Tsu02g00551 387 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 52 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00551 Tsu-Chr2 4660899 4663334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00551 70 143 Trihelix Transcription Factor Family AT5G03680 33.333 2.87e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00551 - - gmx:100793052 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00551 02 4660899 4663334 Tsu02g00551 02 4660899 4663334 ECH