Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00542 ATGGGGCTTCCTCCGAAGTATACTTTAATAAAAGCATGGCAAAAACTGAAACGAGTTCACCGTCGAGCACAGCCAAATGACGGTTTCGCAAAGATCTTACAAGAACTGGATCAGAAACTGCATGGGAAAGTTTCAATGGAGTGGCAGCATCAGAAACCAACCATGAAAGTTTGTCCCATCTGTGGAAAAAATGCTGGGTTAAGCAGTAGTTCACTTATGTTACATCTGCAGAAATCGCATAAAAAACTATCATCAGGTAGTGTAGATAGTGCCATGACAATGGAGATCCAAAAGGCATTAACAGCTTTGAAGATTAGCCACAGTGGGAGTATCAGCCCCACACATATAAGACTTCTCCAAACGATAGCAGTTTATAAATTGTTGTGCAAATCGACATGCGTGATAGACACTCATTTCATAATTGAACAAGTTTAG 435 0.4046 MGLPPKYTLIKAWQKLKRVHRRAQPNDGFAKILQELDQKLHGKVSMEWQHQKPTMKVCPICGKNAGLSSSSLMLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISHSGSISPTHIRLLQTIAVYKLLCKSTCVIDTHFIIEQV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00542 144 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 5 115 - -
Tsu02g00542 144 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 5 115 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00542 Tsu-Chr2 4576383 4577141 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00542 3 106 Protein tyrosine phosphatase (PTP) family AT5G23720 78.846 5.01e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00542 K14165 K17614 ahf:112770730 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00542 02 4576383 4577141 Tsu02g00542 02 4576383 4577141 ECH