Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00541 ATGGCTAAGAGATCAGATTTTGCACAGAAGCTTCTCGATGATCTGCGCCTAAGGAAAGAACAAATGGCTGCTACTACATCACATTCTCACAACTCAAACCAATCCCGCCATTTGCCTACAGCAGATGCATATGCATACACCAAGCAAACCTACAGAGGGTCGACAAATACAAGCGCAAATGAAATTGTTAGTTCGAGAAATAGGGAGATGGTAAATATGTCTAGCAGAAAGCCGAGATCTGTAAAGAGCTGGGGAAACTTGTCAAATCAGATTATTCCATACGGGAAAGCCTTTGAGCATAATGGAGGGAAACTAAGAAGAGACGATTTGTCTTTCACCAATTCAATTTTGGGTTTCCTTCACCAAATTCAGAGTGGGACAATGGATAGAGGAGGCAACTTGGAAAGGCAACTAGCTTCAACTAGCCAAACCCTCTCTCGTGTGCGGATAAATGAGATATCAAAAGGTGCACACAAACTAAACCACATATTGAGAGCTTGCTTCTCCAATGGTGTTAACATGGATACACATTCATTAAATTTTGCAAAGGAACTATTACAAGGAGCTATTGATTTGGAAGAATCCATCAGGATGCTAGTAGACCTGCAGAAAAGTTCAGAGTTTATGATTACCTCGCAAGCGCAGAACAAAAATCGAATCACGCTATTAGAAgagaaggaggaggaggaggataaTGAAGTGGGTGAGAGGAGAATGGAGAAAATGCAACTGGCACATCCAACTTTCTCGTTTGAAAACAAGATGCAGAGACCAATTACCATCACTAACTCTAAGGAAGCCAGAAAGATAAAAGATTCTCAGCAGAAACGAATATCAACCAACACTGGTGGAACTGCTGACATTTCAAACCAGACGGTCGGCAAGGGAAGGATTCCAAACATAATAGCCAAACTAATGGGGCTGGAAAACCATCCCGAGAAGGACTCAGGTAATAGTAATATTGCATCATCCAAGCACTCTGCCAAAGGAAGCAGCAGCACTACACTGAAGAGCAAACAAATAGACAATTTGATCAAAAACCAAAAAGTGGCTGTTGGATCCTTCAAAAACCTGATGTTTGGTGGTCCAGATACAAATTTGGTCCTCGAAAACCAAAAGGCTACCTATTATTCTGAGTCTGAGGTGGCTGGAATAAAAGCATTGAAGGGCTTTGACAAGGCCAACATCATCGAAGGTTCTGCTCGTCAAAATTATGTTGAGGTGATGATGGGAAGGAAACAGGATCACCCACATAACAGTGGCACGTTGAAGGGAAGAAGCACCGATGACAATGATGTGGGTCAAAATCTAAATAATTTGCATGAAAGAAGATCCCAAGTTAAACCTGCCattcaaattgcaaaagaagaACATACAGTTACAAACAAGCACATGCAGATGAACAATGAAAAGAAGTCTCGGGATCATCTCGTAGTTCAAAAGTCAATACTCTCCACAGGTGGAGGGACTGAAATGAGACCCAAGAATTCACCAAAACAATCCACCAATAAtgttcaaaagaagaaaaagaaatcatcCATAAACCAACCCACACCATCCAAGAAATCAAGTGATGATCATGATCTAGTCGTATCCAATGAGAAagtaaaagaaattattaatagGAAGAAGTCCTCCCCAAGATATCAAGAATTTGAACGAGCTAATGGGAGACAAAAACTCAAGGATCATAAACTCGCGACCAGCAACAAAATAAAGCCTGAAAAGATTGAACAAATTTTGAGTAGAAATAGACAGGAAGCTTGTGATAGAGCATCTGGCCAACTCAATGTCTTAAACGGAGCAGAGAAAAAAAGGTTTAGCATGTTCGTTGAACAGGAACTGCTTCCTCCTACTACATTATACAATTCTAGCGGTGGTGGAGATTTGCAAGAATCGGCCAAGGATTTGaAATATCAAGCTGTGCAACAGATAGCAATCAATTTGCAAGATCAAGTTGTTCCTGAGGCACCACATGAAGGATTCAAGACTAGTGAAGTTGCAAACcataaaagtaaaacaaacgGAGTTCTGGAAGACGGAATGGGTGTGAAACTACAAGATCAAAATATAAGCATTCAACAACCACTAACAGAAAGTGAAAACTGCCTCAAGTGGAATTTGGTCACGAGTCAATTATTCGTCAACACCGCAGAAGCACTTTTCAGACTAAACATCCCGTTTGGTATTCTTCAAGGTGACTGTCAAGACAGTCAAGACCAAAGTAGCAAACTCATATTAGATTGCGGCTATGAAGTGATGAAAAGAAAGGGGATACGGCAGGAACTCAAAGTTCatacttgttcaaaaatattatcaatcaCTAGTACTTTTAACTTAATAAGATCCCTAGATGACTTGGTTAGGAAGTTGAATGAGGACATGGAGAAGCTTAAATTCTACGGAAGGAAAAAAAGTAGTCAAGTTGATGTAGAAGATTACCTGCCTAAGATGCTTGAGCATGATGTCTATGATAAATGTCCAGACATAGACTGCATGTGGGATTTGGGTTGGAATGACGAGACATTTGCATTTATCGAAAAATATGATGTTATAAGGGATACAGAAAAGCATATCCTTAGTGTACTTCTGGATGATATCACCAAAGATTATTGCACGATCAAGGAGGATCGATTGAATATGATAACCATACCATGA 2658 0.3856 MAKRSDFAQKLLDDLRLRKEQMAATTSHSHNSNQSRHLPTADAYAYTKQTYRGSTNTSANEIVSSRNREMVNMSSRKPRSVKSWGNLSNQIIPYGKAFEHNGGKLRRDDLSFTNSILGFLHQIQSGTMDRGGNLERQLASTSQTLSRVRINEISKGAHKLNHILRACFSNGVNMDTHSLNFAKELLQGAIDLEESIRMLVDLQKSSEFMITSQAQNKNRITLLEEKEEEEDNEVGERRMEKMQLAHPTFSFENKMQRPITITNSKEARKIKDSQQKRISTNTGGTADISNQTVGKGRIPNIIAKLMGLENHPEKDSGNSNIASSKHSAKGSSSTTLKSKQIDNLIKNQKVAVGSFKNLMFGGPDTNLVLENQKATYYSESEVAGIKALKGFDKANIIEGSARQNYVEVMMGRKQDHPHNSGTLKGRSTDDNDVGQNLNNLHERRSQVKPAIQIAKEEHTVTNKHMQMNNEKKSRDHLVVQKSILSTGGGTEMRPKNSPKQSTNNVQKKKKKSSINQPTPSKKSSDDHDLVVSNEKVKEIINRKKSSPRYQEFERANGRQKLKDHKLATSNKIKPEKIEQILSRNRQEACDRASGQLNVLNGAEKKRFSMFVEQELLPPTTLYNSSGGGDLQESAKDLKYQAVQQIAINLQDQVVPEAPHEGFKTSEVANHKSKTNGVLEDGMGVKLQDQNISIQQPLTESENCLKWNLVTSQLFVNTAEALFRLNIPFGILQGDCQDSQDQSSKLILDCGYEVMKRKGIRQELKVHTCSKILSITSTFNLIRSLDDLVRKLNEDMEKLKFYGRKKSSQVDVEDYLPKMLEHDVYDKCPDIDCMWDLGWNDETFAFIEKYDVIRDTEKHILSVLLDDITKDYCTIKEDRLNMITIP 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00541 885 MobiDBLite consensus disorder prediction 485 563 - -
Tsu02g00541 885 MobiDBLite consensus disorder prediction 485 520 - -
Tsu02g00541 885 PANTHER EXPRESSED PROTEIN 641 872 - -
Tsu02g00541 885 PANTHER EXPRESSED PROTEIN 1 587 - -
Tsu02g00541 885 MobiDBLite consensus disorder prediction 413 432 - -
Tsu02g00541 885 MobiDBLite consensus disorder prediction 310 337 - -
Tsu02g00541 885 MobiDBLite consensus disorder prediction 266 292 - -
Tsu02g00541 885 MobiDBLite consensus disorder prediction 313 337 - -
Tsu02g00541 885 PANTHER OS01G0228800 PROTEIN-RELATED 641 872 - -
Tsu02g00541 885 PANTHER OS01G0228800 PROTEIN-RELATED 1 587 - -
Tsu02g00541 885 MobiDBLite consensus disorder prediction 521 563 - -
Tsu02g00541 885 MobiDBLite consensus disorder prediction 276 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00541 Tsu-Chr2 4572813 4576070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00541 674 874 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 40.777 1.85e-36 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00541 - - mtr:MTR_8g107730 1328.92