Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00537 ATGGCTTTCTTTGACCAATCACATCGCAACTCTCTTGTTCCTGGATTTCTTTACTCATCAAATGCACTCTCTCATTTGGATTCTACATCAATCAACAACACCATTAATCATGCAGGGTTACCACCATCATCACATTCATCATCATTACCATCACGATCACATGAATGGACTAGGAAAAATATTCCTATGATCCCTTCACCAAATGAGAGTATCCCAATGTTTTCTCCCGCGTACTATGGTGCGTGCAGTGCCGGCGGTGTCTTCAGCTGTGGTCTTACTCATATGGCTGTCACTCCTCTTGATCTCGTCAAGTGCAACATGCagATTGACCCTAAAAAGTATAAGAGCATCACTTCAGGATTTGGAATTTTACTGAAGGAGCAGGGTGCTAGAGGTTTCTTCAAAGGCTGGGTGCCAACTTTGCTTGGTTACAGTGCTCAAGGAGCATGCAAGTTTGGATTCTATGAATTCTTCAAAAAGTATTACTCAGATCTTGCAGGACCAGAGAATGCAGTCAAGTACAAAACTTTCATATATCTAGCTGGTTCTGCTTCAGCTGAAGTTATTGCTGATGTTGCACTTTGTCCTATGGAGGCGGTAAAAGTTCGTGTTCAAACTCAGCCTGGCTATGCTCGTGGTTTGTCCGATGGATTACCTAAGTTTATCAAGGCTGATGGTGTTTCTGGGTTGTATAAAGGACTTGTTCCTCTTTGGGGCCGTCAGATACCATACACGATGATGAAATTTGCTTCATTTGAGACTATTGTGGAGATGATCTACAAAAATGTCATTCCAACCCCCAAAGATCAATGCAGCAAAAGTAAGCAACTTGGAGTCAGTTTTGCAGCAGGATATATTGCAGGTGTACTGTGCGCAATTGTCTCACACCCTGCTGATAACCTTGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTGTTGGTGATGCAGTGAAGAAGATTGGAGTAGTTGGTCTTTTCACTCGCGGTCTTCCTCTCCGTATAGTTATGATTGGAACACTAACTGGAGCTCAGTGGGGTCTCTATGATTCATTTAAAGTATTTGTTGGGCTGCCAACTTCTGGTGGAGCTGCTCCTGCACCTGTGAAATAG 1110 0.4315 MAFFDQSHRNSLVPGFLYSSNALSHLDSTSINNTINHAGLPPSSHSSSLPSRSHEWTRKNIPMIPSPNESIPMFSPAYYGACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPKKYKSITSGFGILLKEQGARGFFKGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGYARGLSDGLPKFIKADGVSGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKNVIPTPKDQCSKSKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTSGGAAPAPVK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00537 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 161 IPR018108 -
Tsu02g00537 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 258 IPR018108 -
Tsu02g00537 369 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 369 IPR044677 GO:0005315|GO:1990547
Tsu02g00537 369 PANTHER PHOSPHATE CARRIER PROTEIN 1 369 - -
Tsu02g00537 369 SUPERFAMILY Mitochondrial carrier 82 349 IPR023395 -
Tsu02g00537 369 Pfam Mitochondrial carrier protein 176 262 IPR018108 -
Tsu02g00537 369 Pfam Mitochondrial carrier protein 83 163 IPR018108 -
Tsu02g00537 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 275 354 IPR018108 -
Tsu02g00537 369 Gene3D Mitochondrial carrier domain 80 355 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00537 Tsu-Chr2 4550692 4553228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00537 6 367 Chloroplast and Mitochondria Gene Families AT5G14040 74.728 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00537 K15102 - gmx:100800530 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00537 02 4550692 4553228 Tsu02g00537 02 4550692 4553228 ECH