Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00532 ATGGATGATGACCATCAATATGAAAATGGTAGGCATAAGGTGGAATACTACAGAGGAGCACATTCCCCGTGGAATACGGATCCCCAACATCAAATAAAGGAACAAAATGCCCtagttatgaataaaaaaattaggtccATTATGGCTGAAAGGCAGGCTGCCCTTCTGGAACTTGAACTAGAGGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGCAGCCCTTCGGCAAAGGGATGAAGCACTTGCTCAGAGAGATAATGCTCTATTGGAACGGGATAATGCCCTTGCAGCCCTTCAAAGTCGGAGTAGTGCTGCCAATTTTCCATTCAACGGTGGAATTCAACGTGGATCAAAGCGGATGCACCATTCTTCAAACCATATATCCAACATGGCAGAACCAGCGTATAGCACGACAGATATAATAATAAGAGACGCTTCCCCGGTTACTGTTATAACTTCTGAAGCTGTCAAATCTCATCTAACGAAGAGAACAAAGGAGAACAAGGCATCAAAGCCACCAACCAAAATAAAGAAACTGGGTGAAGATTTAAATAGGAAGGCTTATTCTGAAGGAATAAAGATCAAATCCGAATGGGATAGACAGGATGTTGGCTTGAATTTGATTGCTTTCGATGAAACAGTCATGCCTGTCCCAGTTTGCTCGTGTACCGGAGTACCACGACAGTGCTACAAATGGGGGAATGGTGGATGGCAATCATCTTGTTGTACCACTACATTGTCAATGCATCCACTACCACAACTTCCCAACAAGCGCCATGCCCGCATTGGAGGGCGGAAAATGAGTGGCAATGTTTTTATCAGACTTCTCAGTAGGTTTGCATCAGAAGGCCATGATTTATCTATACCATTGGATCTTAAGGATTACTGGGCCAGACATGGAACAAATCGTTACATCACTATCAAGTAG 939 0.4292 MDDDHQYENGRHKVEYYRGAHSPWNTDPQHQIKEQNALVMNKKIRSIMAERQAALLELELEAAISEKNEALAARDAALRQRDEALAQRDNALLERDNALAALQSRSSAANFPFNGGIQRGSKRMHHSSNHISNMAEPAYSTTDIIIRDASPVTVITSEAVKSHLTKRTKENKASKPPTKIKKLGEDLNRKAYSEGIKIKSEWDRQDVGLNLIAFDETVMPVPVCSCTGVPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGNVFIRLLSRFASEGHDLSIPLDLKDYWARHGTNRYITIK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00532 312 Coils Coil 53 94 - -
Tsu02g00532 312 PANTHER - 1 312 IPR010409 -
Tsu02g00532 312 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 312 - -
Tsu02g00532 312 Pfam GAGA binding protein-like family 1 312 IPR010409 -
Tsu02g00532 312 SMART GAGA_bind_2 1 312 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00532 Tsu-Chr2 4495971 4497003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00532 1 312 BBR or BPC Transcription factor family AT2G21240 58.599 2.10e-127 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Tsu02g00532 GAGA_bind 3.6e-98 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00532 - - gmx:100813103 521.161