Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00526 ATGATTAATGGTAGGTGTGCAGCTTGCAAGAATCAAAGAAGAAGGTGTCCTTCTGATTGCATTTTTTCTCCATATTTCCCTCCCAATGATCCTCAAAGATTTGCTTCTGTTCATCGAATCTATGGTGGTAGCAATGTGGGAAAAATGCTTCAgCAATTGCCTAAGAATGTACGACAACAAGCTACAAATAGTTTGTATTTAGAAGCACAATGTAGGATTCAAGATCCTGTTTATGGATGTGTTGGAATTATCTCTAAATTGTATGAACAAATCCATGAGACAGAAATTGAGCTGAccaaaattcaaactcaaattgcTTGTCATAAACTCCAAATTCCACAGTTTGAAGCTGAATCAAATTTCAATGAATTGTCCACAGTTGATGctgaattaaatttaatttaa 405 0.3235 MINGRCAACKNQRRRCPSDCIFSPYFPPNDPQRFASVHRIYGGSNVGKMLQQLPKNVRQQATNSLYLEAQCRIQDPVYGCVGIISKLYEQIHETEIELTKIQTQIACHKLQIPQFEAESNFNELSTVDAELNLI 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00526 134 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 116 - -
Tsu02g00526 134 Coils Coil 84 104 - -
Tsu02g00526 134 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Tsu02g00526 134 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Tsu02g00526 134 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00526 Tsu-Chr2 4431409 4432115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00526 5 114 AS2 family AT3G26660 63.636 2.37e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu02g00526 LOB 7.3e-37 No_clan