Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00522 ATGGATTTTGTGAAAAAGTGTAAGAGAGTGTTGGGAAGCAACAAGAGATTGTATGATTCAGATGAAAGTAGTGGAAGTGGAAGCTATGGAAAAATATCAGAGAAAAAGTTTCACAAAAAGCAAAAGGATGTTAATAAGAAACCACCAAATGGTTGTCTTTGTGTTTATGTTGGATCTGAGAGACAAAGATTTGTAATAAAGATCAAAATATTCAATCATCCTTTGTTTAAAACATTTTTAGAAGATGTTGAGAATGAATATGGTTATACAAATGATGGTCCTCTATGGCTTCCTTGTCATGTTGACTTGTTTTGTGAGGCACTTGTGGAGATAGAGAGTGATGATATGGGTTTTGTAGGTTGCAATTTTCCAATTGTTCACAAACACGGTCCAATTTCTCATTCTTCATTTTCTTGTAAATCTAGTAACCTGAATTGTGATGTAAATTACCAGGTTTTGGTATAG 465 0.3333 MDFVKKCKRVLGSNKRLYDSDESSGSGSYGKISEKKFHKKQKDVNKKPPNGCLCVYVGSERQRFVIKIKIFNHPLFKTFLEDVENEYGYTNDGPLWLPCHVDLFCEALVEIESDDMGFVGCNFPIVHKHGPISHSSFSCKSSNLNCDVNYQVLV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00522 154 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 150 IPR003676 GO:0009733
Tsu02g00522 154 Pfam Auxin responsive protein 28 108 IPR003676 GO:0009733
Tsu02g00522 154 PANTHER SMALL AUXIN-UP RNA-RELATED 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00522 Tsu-Chr2 4384683 4385177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00522 49 104 Calmodulin-binding Proteins AT4G34750 46.429 1.29e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00522 K14488 - cam:101489648 216.468