Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00521 aTGGATTTTGTGAAGAAGTGTAAGAGGGTATGTGGAAGCAGCAGCAAGAGATTGTATCCAGAAGAGAGTAGTGGCAGTGGAAGAAGCAGTTATGGCAAATTATCAGAAAAGTGTCCCAAAAAGCAAGAGGATGTTACTAATAAGAGACCACCAAATGGTTATCTTTGTGTCTATGTTGGACCTGAGAGACAAAGATTTGTAATCAAGATCAAAATATTCAATCATCCTTTGTTCAAAACACTTTTAGAAGATGTTGAGAATGAATATGGTTATACAAATGATGGTCCTCTATGGTTTCCTTGTGATGTTGAGTTGTTTTGTGAGGCACTTGTGGAAATAGAGAGTGTTTGA 351 0.3704 MDFVKKCKRVCGSSSKRLYPEESSGSGRSSYGKLSEKCPKKQEDVTNKRPPNGYLCVYVGPERQRFVIKIKIFNHPLFKTLLEDVENEYGYTNDGPLWFPCDVELFCEALVEIESV 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00521 116 Pfam Auxin responsive protein 31 110 IPR003676 GO:0009733
Tsu02g00521 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 115 IPR003676 GO:0009733
Tsu02g00521 116 MobiDBLite consensus disorder prediction 17 31 - -
Tsu02g00521 116 MobiDBLite consensus disorder prediction 16 46 - -
Tsu02g00521 116 PANTHER SMALL AUXIN-UP RNA-RELATED 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00521 Tsu-Chr2 4367458 4367808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00521 51 106 Calmodulin-binding Proteins AT3G43120 55.357 2.34e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00521 K14488 - cam:101489648 169.088