Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00520 atGGATTTTGTGAAGAAGTGTAAGAGAGTATTGGGAAGTAACAAGAGATTGTATGATTCAGAAGAAAGTTGTGGAAGTGGAAGCTATGGCAAAATATCAGAAAACAAGTTTCACAAAAAGCAAAAGGATATTAATAAGAAACCTCCAAATGGTTGTCTTTGTGTTTATGTTGGATCTGAGAGACAAAGATTTGTAATCAAGatcaaaatatttaatcatCCTTTGTTCAAAACACTTTTAGAAGATGTTGAGAATGAATATGGTTATAGAAATGATGGTCCTCTATGGCTTCCTTGTCATGTTGACTTATTTTGTGAAGCACTTGTGGAGATAGAGAGTGCTATGGATCACAAGCATAACTCAGTTTCACATTCTTCATTGTCTTGTCGTTCTAATTATAACTTAAGTTCTGCTGCCAATTATGAGATTTTGTTATGA 438 0.3265 MDFVKKCKRVLGSNKRLYDSEESCGSGSYGKISENKFHKKQKDINKKPPNGCLCVYVGSERQRFVIKIKIFNHPLFKTLLEDVENEYGYRNDGPLWLPCHVDLFCEALVEIESAMDHKHNSVSHSSLSCRSNYNLSSAANYEILL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00520 145 PANTHER SMALL AUXIN-UP RNA-RELATED 1 126 - -
Tsu02g00520 145 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 126 IPR003676 GO:0009733
Tsu02g00520 145 Pfam Auxin responsive protein 22 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00520 Tsu-Chr2 4361088 4361609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00520 49 104 Calmodulin-binding Proteins AT4G34750 48.214 9.08e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00520 K14488 - cam:101489648 193.356