Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00519 ATGGCaaacaaaatgaatataaaGTTAGGAGAACCAACTCTTGTTCTTCCTGCAGAACCAACAAAGAAGGGACTATACTATCTTTCAAACCTTGATCAAAACATAGCATATCCAGTTCGTACAATTTATTGTTACAAATCATCTTCTAAAGGCAATGAAAATGTTGCACAAGTAATTAAGGATTCTTTGTCAAAGATTCTTGTTCATTACTATCCTATGGCTGGAAGGTTGACAATAAGCTCAGAAGGAAAGTTGATAATAGATTGCACTGAAGAAGGTGTTGTGTTTGTTGAGGCTGAAGCAAATTGTATGatggaggatttgggtgataTGACAAAGCCTAACAAtattgaaattcttagaaaacTTGTTTATGATATTCATACTGCAAAGAACTTACTTGAGATACCTCCTCTGCTTATTCAGGTAACAAAGTTCAAATGTGGAGGATTTGTTTTGGGAGTAAATGTGAATCATTGTATGAATGATGGTATAAGTGCTATGCAATTTGTGAACTCTTGGAGTGACATAGCAAGAGGACTAGACTTAAAAATTCCACCATTTCTAGACAGAACAATACTCAAACCACGTAATCCTCCACAAATAAACTTCCCACACAATGAATTTGCTGAAATTGAAGATCTATCAAACACAAAACAATTAAttcaagaggaagaagaaatggtCTACAAGTCCTTCTATTTCAATGAGAACAAACTTGAACTTCTCAAGAAAAAAGCCACAGAAGATGGTATTGTGAATAAGTGCTCAACTTTTGAAGCACTTTCAGCTTTTGTTTGGAGAGCTAGAACTAAAACTTTAAATGTGCATCCAAATCAAGAAATGAAGTTACTTTTTGCTGTTGATGGAAGATCAAAATTTGTTCCACAAATACCAAAAGGGTATTTTGGTAATgcaattattttgtcaaatgcTATGTGTAAAGCAGGTGAATTATTGAAGAATCCATTATCATTTAGTGTGGAAGTGATTAAAAGATCAATTGAAATGGTAACTGATAGTTACATGAGATCTGCTATTGATTACTTTGAAGTTAACAGAAGTAAGCCATCTTTAACATCAACACTTTTGATTACAACATGGACTAGGTTGTCTTTTCATGAAGCTGATTTTGGTTGGGGGAAACCTAGGAGTTTTTGTCCTGTTACTTTGCCACAAAAggaagttattttgtttttaccacATGGTGAAAATACTAGAAGTATAAATGTGTTTGTAGGTTTGCCTGCTTCTactatgaaaatatttgaaaagaATATGGAGATGTGA 1290 0.3054 MANKMNIKLGEPTLVLPAEPTKKGLYYLSNLDQNIAYPVRTIYCYKSSSKGNENVAQVIKDSLSKILVHYYPMAGRLTISSEGKLIIDCTEEGVVFVEAEANCMMEDLGDMTKPNNIEILRKLVYDIHTAKNLLEIPPLLIQVTKFKCGGFVLGVNVNHCMNDGISAMQFVNSWSDIARGLDLKIPPFLDRTILKPRNPPQINFPHNEFAEIEDLSNTKQLIQEEEEMVYKSFYFNENKLELLKKKATEDGIVNKCSTFEALSAFVWRARTKTLNVHPNQEMKLLFAVDGRSKFVPQIPKGYFGNAIILSNAMCKAGELLKNPLSFSVEVIKRSIEMVTDSYMRSAIDYFEVNRSKPSLTSTLLITTWTRLSFHEADFGWGKPRSFCPVTLPQKEVILFLPHGENTRSINVFVGLPASTMKIFEKNMEM 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00519 429 Pfam Transferase family 10 428 - -
Tsu02g00519 429 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 7 428 - -
Tsu02g00519 429 Gene3D - 1 210 IPR023213 -
Tsu02g00519 429 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 428 - -
Tsu02g00519 429 Gene3D - 211 427 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00519 Tsu-Chr2 4342735 4344896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00519 5 425 Monolignol Biosynthesis Gene Families AT5G48930 38.018 6.80e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00519 K15400 - gmx:100775546 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00519 02 4342735 4344896 Tsu02g00519 02 4342735 4344896 ECH