Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00507 ATGGAGAGACATGAAGTGATATTCCCTATCTCATCTTCAAAAGATGCTTCTGCTATTGATGTTAAACCCGGCAATGCCTCTAATATTCATGTTAAAAAAGCTGAATTATCTCAAAAAACTATAAGGAAGGAGACATCAAGGCAGAAAGGAGGCAAAGAAACAATGAAGCACAAATATGTATTTCAAACAAGGAGTCAGATTGATATACTAGACGATGGGTTCCGATGGAGAAAGTATGGCGAAAAGTCAgtgaaaaacaacaaatatcCTAGAAGTTATTACAAATGCACTTATCGAGGCTGCAATGTAAAGAAACAAATCCAAAGGCATTCCAAAGAGGAGCAGATTGTAGAAACAACTTACGAGGGAGTGCATATTCACCCTGTGGAGAAGTCGACTGAAAGCTTCGACCAGATCttgaaaaaatttattacaagCAATCAACTGTATAATGTAACTGCAATGTAA 468 0.3504 MERHEVIFPISSSKDASAIDVKPGNASNIHVKKAELSQKTIRKETSRQKGGKETMKHKYVFQTRSQIDILDDGFRWRKYGEKSVKNNKYPRSYYKCTYRGCNVKKQIQRHSKEEQIVETTYEGVHIHPVEKSTESFDQILKKFITSNQLYNVTAM 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00507 155 ProSiteProfiles WRKY domain profile. 65 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g00507 155 SUPERFAMILY WRKY DNA-binding domain 62 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g00507 155 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 145 IPR044810 GO:0003700
Tsu02g00507 155 Gene3D WRKY domain 57 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g00507 155 Pfam WRKY DNA -binding domain 71 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g00507 155 SMART WRKY_cls 70 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g00507 155 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00507 Tsu-Chr2 4243431 4244323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00507 58 151 WRKY Transcription Factor Family AT5G13080 67.021 4.20e-45 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu02g00507 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00507 - - gmx:100127378 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00507 02 4243431 4244323 Tsu02g00507 02 4243431 4244323 ECH