Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00468 ATGGGTTGTAAGTTTTCCATGTTATGCTGCTGTAATACTGAGCAAGGTGGTGTTCAGGTTCCTGAGGCTAACATTGAGGaaaatgaagataataatatTGAGGGTGATGGCTTGCCGTCGTTTCGTGAATATACTGTTGATCAGCTTAGGAAGGCCACCTCTGGATTTGCAGTAGAGAATATAGTTTCCGAGCATGGAGAGAAGGCTCCAAATGTTGTCTATAAAGGGAAACTTGAAAACCAAATGCGAATTGCCATCAAACGGTTCGACAAATCAGCTTGGCCAGATGCCCATCAATTTTTGGAAGAGGCCAGAGCTGTTGGTCAGCTAAGGAGCCAAAGATTGGCAAATCTGCTTGGTTGCTGCTGTGAAGGTGATGAAAGGCTGCTTGTATCAGAATACATGTCCAACGATACTTTGGCTAAGCACCTGTTCCATTGGGAAACACAGCCTATGAAATGGGCAATGCGACTTAGAGTTGCTTTACACCTTGCCCAAGCTCTAGAGTACTGTACCAGCAAAGGACGTGCTCTGTATCATGATCTAAATGCTTACAGAGTTCTCTTTGATGATGACTTCAATCCCAAACTTTCATGCTTTGGTTTGATGAAAAACCGTCGAGATGGGAAAAGTTATAGTACAAACTTGGCATTTACGCCACCTGAGTATCTCAGGACAGGTAGAGTTACTCCAGAGAGTGTAACTTATAGCTTTGGGACCCTTTTGCTCGACCTTCTCAGTGGAAAACATATTCCTCCAAGCCATGCCCTTGACCTGATCAGGGACAGGAACCTTCAGAGTCTAACAGACTCGTGTTTAGAAGGACAATTTTCAGATGATGAGGGGACTGAATTGGTTCGTCTAGCCTCACGATGCTTACAATCTGAACCTCGAGAGCGTCCTAATCCAAGGTCACTGGTCACTGCTCTAATACCTTTACAGAAAGATTCTGAGGTTAGCTGTCTTTGA 969 0.4386 MGCKFSMLCCCNTEQGGVQVPEANIEENEDNNIEGDGLPSFREYTVDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAIKRFDKSAWPDAHQFLEEARAVGQLRSQRLANLLGCCCEGDERLLVSEYMSNDTLAKHLFHWETQPMKWAMRLRVALHLAQALEYCTSKGRALYHDLNAYRVLFDDDFNPKLSCFGLMKNRRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQSLTDSCLEGQFSDDEGTELVRLASRCLQSEPRERPNPRSLVTALIPLQKDSEVSCL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00468 322 PANTHER TPR DOMAIN KINASE 1 320 - -
Tsu02g00468 322 SUPERFAMILY Protein kinase-like (PK-like) 35 313 IPR011009 -
Tsu02g00468 322 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 320 IPR045845 GO:0004672|GO:0009742
Tsu02g00468 322 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Tsu02g00468 322 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00468 322 Gene3D Transferase(Phosphotransferase) domain 1 136 321 - -
Tsu02g00468 322 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00468 Tsu-Chr2 3916346 3922237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00468 20 310 Glycoside Hydrolase AT3G07070 35.913 2.68e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Tsu02g00468 PK_Tyr_Ser-Thr 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00468 K14500 - jre:109014463 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00468 02 3916346 3922237 Tsu02g00468 02 3916346 3922237 ECH