Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00461 ATGTCTGGATGCAATAAATCACCTAGAAATGATCAACATTCAATCAAATATCGGTGGATTCAATATGGAGAGGCATCCTCTAAGGCTGATCTTTCTCGTGTAGATTGTTCGCCTCCTCTTTCCAATAATGAGAACAAGCAATGCTATAGAACTTCTCAGCTGAAGCCACCTGAGATACTGACCACGCCGCAGCTCATCTCTGCAATAGGCCAGTTATGGGATTCTGCTAGTCGCCCACTTTCATTTTTACTCCCGAAGGAAAATGTGAATAAAGATGATAAAGGATTCTCAAAAGAGAAAATTCTGGGTAACATTCATGAGAATAACAATGGTGTGGTTACTTCAAATAACACTAATTATTATTCTGTTAATCCGGGTACTACTTGTTTCGGTTCACAAATTGTGCAGGAAAAATTGGATTTCCCTAAGGTAACACAGAAAATGTTAATACTTGAATCTTCTTATGGAAGTCAAGATTATATACATTCTTTATTCCATAGATTTTCGCAGGCAAGCgataaaaattcaaatgaatATTGTGATAAACTGGAACTTGGGAGTGAAGAAATTTCGTTTAGATCAGGAAATGTTCCTAGTGAGCTAAACTGTCATGCAAAGGTTACTGAGACTGAGAACCTGAAAACTAATTCTTTGGTTGCCAGGGACTGCATTTCAATAGACGCAATCCCCACTTCATTGACTAATGAAAGAGATGTATGCAATCCTGATGTACTCATACGTGAAGCTCCAGCATTATCTAATGATGCAGTTTTGAATACAAAAGAATTTAACCCTCTGTGTTCAGACTACTTTCTTCAAGTTGTGCCTGATAATCAGATGGATGTTGATGCTTGTCAGACCCTATCTTCTAGTATCTATGCAGACTATCATATTATCAACTCTTCCACTACCTGTAACACTGCTAACACTGCTTCTGTGCAGTGCCAATGTAagattgatgataatgaaaatgaaataatggAAATTCAAAGACGGTATTTATCAGATATAACCATTGATGAACCTAAGCTTCAGATCTTCTCTGCAACCCATCAGAAGGCTTCCCATTCCCTAGCCAAGCAAGAACATGCGTTTTCTGGAGCGTTGGCTGGAATATGTGTCAGCTGTTGTCTGCATCCTGTTGACACAATCAAGACAGTTGTTCAATCATGTCGTGTAGAACAGAGGTCCATCTTTTACATTGGCAAATCAATTATTTCTGATAGAGGTTTTCCTGGACTATATCGTGGAATTACTACAAACATTGCATGTTCAGCTCCAATTTCTGCAGTTTATACTTTCACGTATGAATCGGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGAATTATTCTTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCAACATCTTTCATCTTCACTCCTAGTGAGCGAATAAAGCAGCAGATGCAAGTTGGATCTCATTATCGCAACTGCTGGGATGTATTGATCGGAATCATCAGAAATGGTGGCCTTTCCTCGCTATATGCAGGTTGGAGAGCTGTACTATGCCGAAATATCCCACATTCAATGATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATCTTCTAGTATTCAATCCCACACATTTCAGACTTTAGTGTGTGGAGGATTAGCTGGATCGACTGCTGCTTTATTCACAACTCCGTTTGATGTGATCAAGACAAGATTACAGACACAGATTCCTGGATCAAGAAATCAATATGATAGTGTGTTCCATGCCCTTTACAAAATTAGCAAGACCGAAGGTTTGAAGGGCTTATACAGGTATTATTTTCGAAGTTTAGCCATCATTATCATTTAG 1848 0.3826 MSGCNKSPRNDQHSIKYRWIQYGEASSKADLSRVDCSPPLSNNENKQCYRTSQLKPPEILTTPQLISAIGQLWDSASRPLSFLLPKENVNKDDKGFSKEKILGNIHENNNGVVTSNNTNYYSVNPGTTCFGSQIVQEKLDFPKVTQKMLILESSYGSQDYIHSLFHRFSQASDKNSNEYCDKLELGSEEISFRSGNVPSELNCHAKVTETENLKTNSLVARDCISIDAIPTSLTNERDVCNPDVLIREAPALSNDAVLNTKEFNPLCSDYFLQVVPDNQMDVDACQTLSSSIYADYHIINSSTTCNTANTASVQCQCKIDDNENEIMEIQRRYLSDITIDEPKLQIFSATHQKASHSLAKQEHAFSGALAGICVSCCLHPVDTIKTVVQSCRVEQRSIFYIGKSIISDRGFPGLYRGITTNIACSAPISAVYTFTYESVKAALLPYLPKENYSFAHCVGGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDVLIGIIRNGGLSSLYAGWRAVLCRNIPHSMIKFYTYESLKQVMPSSSIQSHTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSRNQYDSVFHALYKISKTEGLKGLYRYYFRSLAIIII 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00461 615 Gene3D Mitochondrial carrier domain 337 485 IPR023395 -
Tsu02g00461 615 ProSiteProfiles Solute carrier (Solcar) repeat profile. 451 534 IPR018108 -
Tsu02g00461 615 Pfam Mitochondrial carrier protein 362 443 IPR018108 -
Tsu02g00461 615 Pfam Mitochondrial carrier protein 453 536 IPR018108 -
Tsu02g00461 615 Pfam Mitochondrial carrier protein 543 604 IPR018108 -
Tsu02g00461 615 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 604 - -
Tsu02g00461 615 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 604 - -
Tsu02g00461 615 Gene3D Mitochondrial carrier domain 486 614 IPR023395 -
Tsu02g00461 615 ProSiteProfiles Solute carrier (Solcar) repeat profile. 358 442 IPR018108 -
Tsu02g00461 615 SUPERFAMILY Mitochondrial carrier 362 604 IPR023395 -
Tsu02g00461 615 ProSiteProfiles Solute carrier (Solcar) repeat profile. 542 615 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00461 Tsu-Chr2 3868520 3873595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00461 341 607 Chloroplast and Mitochondria Gene Families AT1G07030 34.035 1.33e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00461 - - gmx:100812271 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00461 02 3868520 3873595 Tsu02g00461 02 3868520 3873595 ECH