Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00460 ATGCATTGGGAACGGGAGGGAGGGGGAAAAGGGGGAACTGTGAATAGAATTGAAGAAGGTAACCGGCTTGTACTTCTGATAGAGTGGATAAATGCCGTGCTTCCTAACTTTAATCTGCCTTTAGAAATTTCTGAGGAGGAATTGAGGGAATGCTTGAGGGATGGATCGGTATTATGTAGCATTTTGGACAAGTTGGTTCCTGGTTCACTGGAGGGAAGTGGTTCTTTGGATGAGCCGGTGGGTGTTGAAAGGTTTCTGGTGGCATTGGATGAACTTGGATTGTCAGGATTTGAAATGTCAGACCTGGAGCAGGGATCCATGGTGCCCGTGTTGCAGTGCCTTGAGAATCTGAAAGCTCACTTTGTATATAACGCTGTACGAGAAAATATCCGAGGTTGTTCTAGGAAGAGGTGGGACCAGCCGAACCTAACATCCCTTGAAGAAACTGATAGTTGCCTCAAGGACGCTTCAAATTTCCAACATGCTGTTGATGGCTCTGTTGTATCAGATGGAATTGCTTCCATCGATCATATTGGATTCAAGTCTAATGAACTGTTGCAGTTGAAGCAAGGACTGCACATGGATCTTTCAGATGCTAAGCTTAAtgaattattaaaatcaaacaatttggACAGTGTTCCAACTCGATTTCTTTTTAACATAGTAAATATGATCTTAAGTGATATCTTTGAAAGGAAGAATGGAGATATACCTCAAGCTCAACGTACAGCATGCCTGTTGAGGAAAATTCTGCAAGTAATTGAGTTACGCTTTTCAAGTCAAGCAGAAAGCATGAAAAGTcaaaacaatattttcaagGCTCGTGAGGGAAAgtatcaaacaaaaataaatgcgCTTGAATCCTTGGCGGTAGGGACCACCGAAGAGAATGAGGTTGTGGCAGGCTGGGTTCAGCAGTTGAAGTTTTCTTTGCAGCATGAGCAAAATAAATTTGAGGAgatgaagaaaattgaagagCAAGATTTTTCTCAATTGAAGAAAGACAAAGTTCgcaatgaaattgaaatttctcAAATGAAGCAAGATTTGGAAATGGCGAAAAGATCACATGAAGAACATGTTTTGCAGTTAGAATTGCAAGCTTCTGAATCTAAAGCTGAGTATGAGAAAAGGATACAGGAACTTAAATATCATCTGGCTGATGCGAGGAAGCAAGTGAAGGAACTGGAGGCATTTTCGGAATCCAGATATTTGAATTGGAAGAATAAAGAGCACACCTATCAAAGTTTTTTAAACCAACAATTTGGAGCTTTCAagGAATTGAAAGCTGTCATGAAATCTGTGAAAGATGaagtgataaaaacaaaaagaagctACCTAGAGGAATACAAGTACTTTGGGATCAAGCTCAAAGGTCTAGCCGAGGCTGCAGATAATTATCATGTTCTTCTAACAGAAAATAGGAAGTTATATAATGAAGTTCAAGATTTGAAAGGAAATATCAGAGTATATTGTCGAGTTAGACCATTTCTTTCGGGGCAAAGTCAGAAGCATACATCAGTTGAGTTTATAGGTGATGATGGAGAACTAATTATTAGCAATCCTCTTAAACAAGGAAAGGAAAACCGCAagctttttaaatttaataaggTTTTTGGTCAAGCAGCGAGTCAGGAGGAAGTATTCTTGGACACTCGTCCACTAATTCGTTCTGTTCTTGATGGGTTCAATGTTTGTATATTTGCTTACGGTCAAACTGGCTCGGGAAAGACTTATACCATGAGTGGACCTAGCTTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAGAGTAGGAAAAGTTCTATTGATTACGAAATCGGAGTTCAAATGGTTGAAATTTATAATGAACAAGTTCGTGATTTACTATCAAGCAACGGTCCTCAGAAGAGATATCCTTTTCCATTTTTCCCAGACCCCACAATAtTTCTTTTCCTTGACTTGCACACACTTGGGATTTGGAATACTACCCAACCAAATGGGTTGGCTGTTCCTGATGCAACTATGCATTCTGTGAATTCAATGAAAGATGTTCTTGAGTTGATGAACATTGGGCTGATGAATCGGGCAACTAGTGCCACTGCCTTAAATGAAAGAAGCAGTAGATCACACAGTGTTCTCTCTATTCATGTTCGAGGAACGGAAGTGAAGACCAAAACTCTGTTGCGTGGATGTCTGCATCTTGTAGACCTTGCGGGAAGTGAAAGAGTGGATCGTTCTGAAGCAACTGGAGATAGGCTTAAGGAGGCTCAACATATAAACAAATCACTATCGGCGCTTGGAGATGTTATATTTGCTCTGGCTCAAAAGAGCCCACATGTGCCATATAGAAATAGTAAATTGACTCAACTCCTTCAGAGTTCGTTAGGTGGTCAAGCAAAAACCCTTATGTTTGTACAACTTAATCCTGATGTAGCTTCATACTCTGAAACTATAAGCACTTTGAAGTTTGCTGAAAGGGTTTCTGGTGTTGAGTTAGGCGCGGCTCGTAGCAACAAAGAGGGAAGGGATGTGAGAGAACTAATGGAGCagATGGCATCTCTCAAGGACACTGTGGCAAGGAAGGATGAAGAGATTGAGCGATTGCAGTTGCTCAAGTCTAATCATAACGGTGCAAAAGTTGGAATGATTTCACCAAGGCATGCACCATTATCACCAAGTAATGCACCATTATCACCAAGACTTGCACCATTATCACCAAGGAGACATTCCATAGGGACTCCGCGCAACAGTCCCCGCAACAGCATGAGACTTTCTGGAACAAGGAGCCTCGGAGTCAATGGAAAAGTAACTTATGACATGGAAAATGGCTCAGAATACAGTGATAAGCATTCTGAAGCTGGTTCTCATCAATCAATGGATGATTTCAGGAACAAGTCGAGTTCCCTTCAGTTTAAATTAGCTCGAGAAGACATCGATCAAAATTTTAATGACGACATTGATCTCTTAGGATTTGGAGATGCAGATTCAGAGGAGAGATTAAGTGACATATCTGATGGCGGTCTTTCAATGGGGACAGAAACTGATTCAATCAGCAGTATTGTAGAGTACACTCTTTTCCCTGATCTAGAGAAGGCAGCTGAAATTACACCAGCTAAGGAGACAGCATCCAACAACCTTCCGGCTCAGAGCACAGAAAAGTCCGTTATGCCATCGAGAATTCCCAAAGCTAATCAAGTCCAGCCAAAATTGCCGACAAGAACTTCAAGGCTATCATTGAACAGAAGTACCTCAAAGGTTTCTTCAAGTATTAAAAAACCCACAGCCACCGGTTCTTCTTCGGCGAGGTCCTCTAAAAGATGGCAATAG 3339 0.3977 MHWEREGGGKGGTVNRIEEGNRLVLLIEWINAVLPNFNLPLEISEEELRECLRDGSVLCSILDKLVPGSLEGSGSLDEPVGVERFLVALDELGLSGFEMSDLEQGSMVPVLQCLENLKAHFVYNAVRENIRGCSRKRWDQPNLTSLEETDSCLKDASNFQHAVDGSVVSDGIASIDHIGFKSNELLQLKQGLHMDLSDAKLNELLKSNNLDSVPTRFLFNIVNMILSDIFERKNGDIPQAQRTACLLRKILQVIELRFSSQAESMKSQNNIFKAREGKYQTKINALESLAVGTTEENEVVAGWVQQLKFSLQHEQNKFEEMKKIEEQDFSQLKKDKVRNEIEISQMKQDLEMAKRSHEEHVLQLELQASESKAEYEKRIQELKYHLADARKQVKELEAFSESRYLNWKNKEHTYQSFLNQQFGAFKELKAVMKSVKDEVIKTKRSYLEEYKYFGIKLKGLAEAADNYHVLLTENRKLYNEVQDLKGNIRVYCRVRPFLSGQSQKHTSVEFIGDDGELIISNPLKQGKENRKLFKFNKVFGQAASQEEVFLDTRPLIRSVLDGFNVCIFAYGQTGSGKTYTMSGPSLSSKSDWGVNYRALHDLFHISQSRKSSIDYEIGVQMVEIYNEQVRDLLSSNGPQKRYPFPFFPDPTIFLFLDLHTLGIWNTTQPNGLAVPDATMHSVNSMKDVLELMNIGLMNRATSATALNERSSRSHSVLSIHVRGTEVKTKTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSPHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGRDVRELMEQMASLKDTVARKDEEIERLQLLKSNHNGAKVGMISPRHAPLSPSNAPLSPRLAPLSPRRHSIGTPRNSPRNSMRLSGTRSLGVNGKVTYDMENGSEYSDKHSEAGSHQSMDDFRNKSSSLQFKLAREDIDQNFNDDIDLLGFGDADSEERLSDISDGGLSMGTETDSISSIVEYTLFPDLEKAAEITPAKETASNNLPAQSTEKSVMPSRIPKANQVQPKLPTRTSRLSLNRSTSKVSSSIKKPTATGSSSARSSKRWQ 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00460 1112 MobiDBLite consensus disorder prediction 945 966 - -
Tsu02g00460 1112 Coils Coil 347 367 - -
Tsu02g00460 1112 SUPERFAMILY Calponin-homology domain, CH-domain 20 121 IPR036872 -
Tsu02g00460 1112 Pfam Calponin homology (CH) domain 26 121 IPR001715 GO:0005515
Tsu02g00460 1112 Gene3D Kinesin motor domain 428 836 IPR036961 -
Tsu02g00460 1112 MobiDBLite consensus disorder prediction 1042 1112 - -
Tsu02g00460 1112 SMART ch_5 22 120 IPR001715 GO:0005515
Tsu02g00460 1112 Pfam Kinesin motor domain 493 832 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00460 1112 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 1112 - -
Tsu02g00460 1112 Coils Coil 372 399 - -
Tsu02g00460 1112 ProSiteProfiles Kinesin motor domain profile. 487 834 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00460 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 872 IPR027417 -
Tsu02g00460 1112 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1112 - -
Tsu02g00460 1112 PRINTS Kinesin heavy chain signature 704 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00460 1112 PRINTS Kinesin heavy chain signature 735 753 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00460 1112 PRINTS Kinesin heavy chain signature 562 583 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00460 1112 PRINTS Kinesin heavy chain signature 784 805 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00460 1112 Gene3D - 22 122 IPR036872 -
Tsu02g00460 1112 ProSiteProfiles Calponin homology (CH) domain profile. 20 122 IPR001715 GO:0005515
Tsu02g00460 1112 Coils Coil 848 875 - -
Tsu02g00460 1112 MobiDBLite consensus disorder prediction 914 933 - -
Tsu02g00460 1112 MobiDBLite consensus disorder prediction 1041 1112 - -
Tsu02g00460 1112 SMART kinesin_4 485 842 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00460 1112 MobiDBLite consensus disorder prediction 891 933 - -
Tsu02g00460 1112 MobiDBLite consensus disorder prediction 946 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00460 Tsu-Chr2 3860682 3867231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00460 455 868 Calmodulin-binding Proteins AT5G65930 37.019 2.63e-70 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00460 K10406 - gmx:100812813 1706.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00460 02 3860682 3867231 Tsu02g00460 02 3860682 3867231 ECH