Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00456 ATGGAGAGAAGATCTCCTCCTCTGGTCAACCAAAAATGCACATCACGGATGTTTCGAATCTTCAATTTTCGTGAAGCTCATTCCGATGAAACATTAGTTTCCGATAGGCGGCATTTGAATAAACACGACGGTGGAAATGGAAAATCCAGGATTAGTTCAGATGTGCTTAGCACAGTTGATGAAAAGTACCCTCATGCTGATGTAAGTTCCAGAAGAAGAAGAGGTTATAGTTGTAAGAGTATCTGTGTGGAGAATGAACAGATAGTAAATTTGGAAAATGAAGCAACAAAAATGATTGTTAACCAgagatttttcaacaaaaactctCAAGACAAAGATGGTGCAGACTCTCAGCCTAATCAATTTTTGGATGCTGTACAGATTTTATATTCAAACAAGGAACTTTTCACAAAACTTCTGCAAGATCCAAACTCACTATTGGTAAAACAGATTAACGGCTTACAGAAATCTCAAGTAAAAGCAGAACAAAATGGAATGAACATGTTGAATAAAGATCAAAACAGTAGTAATTTTGATAGGTGCAATTTGAGTAAAAATTGCGAGTCACCGTCCTCTAAAAGAATAGTAGTGTTGAAGCCTGGTACAAATAATGTGAACAAATTTGCTGACAATAGAGATGCTCGAAATATGAAGCCTTCACATTTTGCATTTGGTGGTATAAAGAGAAAGTTGAGATATGTCATGAGAGTAAGGAAAAAAGAGCAGCAGTGGATGGCAACTGATTCTGCGCCAATTAAATTTCGCTGCTGTTCGCAGAACTTGGAAGATGGTAAAAATGTAAATGAATTTGATGTTGCTGTAAGAAATTCGCTAAATAATGTCCATGTTAGTACTGGAAAATTTTTGAAGGATCCTGAGTTGAGTGTGAGACAGGAAGTTGCTTCTGACCAAAATAAATTGACCATGAAGGACCAAGGTGCAAAAGTTACATCTCACAACAAACGCATAATGGTTCTCAAAACATTTCATAGAGATGGCGAAGATTGTTCTTATACAAGTTCCTCTTCTCGGAAAATCAAGGATCCACCAGTAGTATCTTTTAGCGATGAGTTGCAGGTTTTTGATGCAGCAGATATTAGTGTCAATACGAATCTTCCTGGCGACAATTTGCATGCACATTATGATATTCCAAGAGGTAACCTATATATAACTCTAGTTTTCCAACTTTTTCTGATCATAGACATTCATAAATATTTGCCTCATTTATCATCTATCATCTATGTATTCATCAATTCTTTAGCATAG 1266 0.3562 MERRSPPLVNQKCTSRMFRIFNFREAHSDETLVSDRRHLNKHDGGNGKSRISSDVLSTVDEKYPHADVSSRRRRGYSCKSICVENEQIVNLENEATKMIVNQRFFNKNSQDKDGADSQPNQFLDAVQILYSNKELFTKLLQDPNSLLVKQINGLQKSQVKAEQNGMNMLNKDQNSSNFDRCNLSKNCESPSSKRIVVLKPGTNNVNKFADNRDARNMKPSHFAFGGIKRKLRYVMRVRKKEQQWMATDSAPIKFRCCSQNLEDGKNVNEFDVAVRNSLNNVHVSTGKFLKDPELSVRQEVASDQNKLTMKDQGAKVTSHNKRIMVLKTFHRDGEDCSYTSSSSRKIKDPPVVSFSDELQVFDAADISVNTNLPGDNLHAHYDIPRGNLYITLVFQLFLIIDIHKYLPHLSSIIYVFINSLA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00456 421 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 90 312 - -
Tsu02g00456 421 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 4 89 - -
Tsu02g00456 421 PANTHER DUF3741 FAMILY PROTEIN 90 312 - -
Tsu02g00456 421 PANTHER DUF3741 FAMILY PROTEIN 4 89 - -
Tsu02g00456 421 Pfam Protein of unknown function (DUF3741) 102 145 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00456 Tsu-Chr2 3831191 3833746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00456 94 242 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 28.221 3.35e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00456 - - mtr:MTR_8g098335 514.612