Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00432 ATGGCTCATGAAGATGACAAAACATCAAGTGGTGGATTTTGTTACAATCCAataattcaaacacaaattcaTCAAGGATTTGTTTCCGATCCAGAGATGTTTAATCTTACAACAGGGATGGAGATGATAGGGTTTTCAAAACATCTTCAACATCAACAAAGTACTAATGACACAAACATGTGGAAAACAAATTTCATAGGAAAATTACCAAGTCAACACTCTGCAGCTGGTTCTTCAAAAACTATGAATGAGTCAAATTTctatcatcaacatcatcaagattTCACTACTAGTAGTGATCATCAAAATCTAAACAACATGGttcatcaacaacatcatcaatggcaacaacaaaatcaacaagttgttgatgatgattcaTCATTAAGATGTGTTTTTCCTTGTGAAGGTAATGAAAGACCAAGTCAAGGACTTTCACTATCTCTTAGTTCAACAAATCCTACATCTATTGGTTTACAATCTTTTGAACTAAGACacactactactactactcaACAAGATCAAGGGTATCATggtcattttcttctcaaaaactCTAAGTTTTTGTTACCAGCTCAACAACTTCTCAATGAGTTTTGTAGCTTAGAAACCACAAAACAAAATGATTTagttttacaaaaacaaaaatctcaaaagttcaacaacaacaaacaaagtTGGGAAGATCAAGATGTTAACAATGGTGGGGGTGCTAGTAGCAGTTCCTCAATAAAACAATCTTTAACCTCTTTAGAGTTTGTTGAATtacaaaagagaaaaactaagcTCCTTTCCATGCTAGAAGAGGTTGATAGAAGGTACAAGAACTATTGTAATCAAATGAAGAGTGTGGTTTCATCATTTGAAGCTGTAGCTGGAAATGGAGCAGCTAAAGTTTATTCAGCTTTAGCTTTAAAAGCTATGTCAAGACATTTTAGATGTTTGAAAGATGGAATATTGGAACAAATTCAAACAACTAGAAAAGCTATGGGAGAAAAAGACCCTATTGCACCTGGTACAACTAAGGGTGAAACACCTAGGCTTAAAATCCTAGATAGAGTTTTAAGACAACAAAGAGCATTTCAACAAATTAACATGATGGAAACTCATCCTTGGAGACCTCAACGCGGTCTTCCCGAACGTTCTGTTTCAATTCTTCGAGCTTGGCTTTTTGAACACTTTCTACATCcGTACCCAAGCGACGTTGATAAACATATTTTGGCCCGCCAAACCGGTCTCTCAAGAAGCCAGgTATCAAATTGGTTTATTAATGCAAGGGTGAGGCTATGGAAGCCAATGGTGGAGGAAATGTATctagaagaagagaaagagcaACAAAGAAACACGACAACCTCGGagggaggaggaggaggaggaaacAACATTAATCATGAAGAGGATAATCTTAATGTACTTCAAAACCAATCTCAAACACAACCTCATGAAGATCAAAAGCCAAGACTCGTTCGAATTGATTCCGAGTGTGTCTCATCCATCATTAACAACAATCATGATCATAACAAAAATGAGGCTAATAAGAATTTGAATCATCATCACCAATTAGCCGTAGATGCATTTGGATCGGTTGATATTGATTTTTCATCTTACAATGCACATCATTCTTCTGATCACATGGTTGCTGCTTACACAAGTAATGAAGGTTTCCACCACGGTGGTGGCGGTGGCGGAGTGTCGTTGACATTAGGGTTACAACAACATGGTGGAAATGGAGTGAGTTTGGCTTTTCCACCAACAACTCAAAGTCCAATGTACTATACAAGGGAACAAATTGATGAACCGGTTCAATACTCTCTTTTGGATGGTGAAGGAACAAATATTATGCCGTATAGGAATCTCATGGGGACACAACTGTTACATGACTTGGCATGA 1890 0.3243 MAHEDDKTSSGGFCYNPIIQTQIHQGFVSDPEMFNLTTGMEMIGFSKHLQHQQSTNDTNMWKTNFIGKLPSQHSAAGSSKTMNESNFYHQHHQDFTTSSDHQNLNNMVHQQHHQWQQQNQQVVDDDSSLRCVFPCEGNERPSQGLSLSLSSTNPTSIGLQSFELRHTTTTTQQDQGYHGHFLLKNSKFLLPAQQLLNEFCSLETTKQNDLVLQKQKSQKFNNNKQSWEDQDVNNGGGASSSSSIKQSLTSLEFVELQKRKTKLLSMLEEVDRRYKNYCNQMKSVVSSFEAVAGNGAAKVYSALALKAMSRHFRCLKDGILEQIQTTRKAMGEKDPIAPGTTKGETPRLKILDRVLRQQRAFQQINMMETHPWRPQRGLPERSVSILRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEEKEQQRNTTTSEGGGGGGNNINHEEDNLNVLQNQSQTQPHEDQKPRLVRIDSECVSSIINNNHDHNKNEANKNLNHHHQLAVDAFGSVDIDFSSYNAHHSSDHMVAAYTSNEGFHHGGGGGGVSLTLGLQQHGGNGVSLAFPPTTQSPMYYTREQIDEPVQYSLLDGEGTNIMPYRNLMGTQLLHDLA 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00432 629 Gene3D - 375 437 - -
Tsu02g00432 629 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 587 - -
Tsu02g00432 629 MobiDBLite consensus disorder prediction 449 465 - -
Tsu02g00432 629 SMART HOX_1 372 436 IPR001356 GO:0003677
Tsu02g00432 629 MobiDBLite consensus disorder prediction 440 465 - -
Tsu02g00432 629 SMART prehox3 177 321 IPR006563 -
Tsu02g00432 629 SUPERFAMILY Homeodomain-like 373 438 IPR009057 -
Tsu02g00432 629 MobiDBLite consensus disorder prediction 221 243 - -
Tsu02g00432 629 ProSiteProfiles 'Homeobox' domain profile. 369 432 IPR001356 GO:0003677
Tsu02g00432 629 Pfam Homeobox KN domain 389 428 IPR008422 GO:0003677|GO:0006355
Tsu02g00432 629 Pfam Associated with HOX 183 319 IPR006563 -
Tsu02g00432 629 CDD homeodomain 372 433 IPR001356 GO:0003677
Tsu02g00432 629 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 7 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00432 Tsu-Chr2 3622372 3626256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00432 118 629 Homeobox Transcription Factor Family AT5G41410 44.774 7.34e-132 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Tsu02g00432 POX 1.2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00432 - - mtr:MTR_8g098815 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00432 02 3622372 3626256 Tsu02g00432 02 3622372 3626256 ECH