Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00429 ATGGCCACAAAAGAGTCAAGTTCTTCGGCTTCAGCTGCAGGGGACACTAAAATCAAAAGGATTCTTACCCATGGTGGTAAATATGCACACTACAATGTGTATGGAAACTTGTTTGAGGTTTCTTCTAAGTATGTGCCTCCCATTCGCCCTATCGGTAGAGGCGCTTATGGTATCGTTTGTGCTGCTGTTAATTCTGATACGCACGAACAAGTTGCTATTAAGAAGATCGGTAATGCATTTGACAATATAATCGATGCTAAAAGGACTTTGAGAGAAATCAAGCTCCTTCGTCACATGGATCATCCAAATATCATTGCCATCAAGGATATCATACGACCCCCGAAAAAGGAGGCATTTAATGATGTATACATTGTTTATGAATTAATGGACACTGATCTCCATCATATAATTCATTCTGACCAACCTCTTTGTGAAGAACATTGTCAGTACTTCTTGTATCAGCTGTTACGTGGGCTGAAATATGTGCACTCGGCTAATGTTTTGCACCGCGATCTTAAGCCAAGTAATTTACTAGTGAATGCAAACTGCGACCTTAAAATTGGTGACTTTGGTTTGGCAAGGACAACATCTGAAACTGATTTCATGACTGAGTATGTTGTCACAAGATGGTACCGAGCCCCCGAATTGCTCCTTAATTGTTCTGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAGCCCTTGTTTCCTGGCAAAGACTATGTTCATCAATTAAGGCTTATCACCGAGTTAATAGGTTCACCTGATGACGCCAGCCTTGGATTTCTCCGAAGTGACAATGCTAGGAGATATTTTAGACAGTTTCAACAATACCGGAAACAAAAATTCTCGTCCAGATTCCCAAACATGTTGCCTGAGGCACTTGATCTGTTAGAAAAAATGCTTATCTTTGATCCGAACAAACGCATTACAGTTGATGAGGCACTGTGTCATCCATATCTTTCATCACTTCACAACACCAATGAGGAGCCAGTCTGTCCTAGGCCATTCACTTTTGACTTTGATCAACCAACATGCACTGAAGAGAATATCAAGGAGCTCATCTGGAAAGAATCTGTCAAGTTCAATCCAGATCCACCTTGTCAGTAA 1140 0.4096 MATKESSSSASAAGDTKIKRILTHGGKYAHYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSDTHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHPNIIAIKDIIRPPKKEAFNDVYIVYELMDTDLHHIIHSDQPLCEEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLVNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYFRQFQQYRKQKFSSRFPNMLPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHNTNEEPVCPRPFTFDFDQPTCTEENIKELIWKESVKFNPDPPCQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00429 379 CDD STKc_TEY_MAPK 38 374 - -
Tsu02g00429 379 SUPERFAMILY Protein kinase-like (PK-like) 48 338 IPR011009 -
Tsu02g00429 379 ProSiteProfiles Protein kinase domain profile. 45 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00429 379 SMART serkin_6 45 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00429 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Tsu02g00429 379 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 378 - -
Tsu02g00429 379 Gene3D Transferase(Phosphotransferase) domain 1 129 358 - -
Tsu02g00429 379 Pfam Protein kinase domain 49 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00429 379 ProSitePatterns Protein kinases ATP-binding region signature. 51 75 IPR017441 GO:0005524
Tsu02g00429 379 Gene3D Phosphorylase Kinase; domain 1 28 368 - -
Tsu02g00429 379 ProSitePatterns MAP kinase signature. 80 183 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tsu02g00429 379 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00429 Tsu-Chr2 3592453 3597614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00429 7 374 MAP Kinase Gene Family AT4G01370 80.435 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tsu02g00429 Pkinase 1.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00429 - - gmx:100785306 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00429 02 3592453 3597614 Tsu02g00429 02 3592453 3597614 ECH
Tsu05g00257 05 1917151 1919786 Tsu02g00429 02 3592453 3597614 PCT