Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00428 ATGATCATATCAGAGAAGAACCGCAGAGAGATCTCCAAATACCTCTTTCAAGAGGGTGTATGCTATGCCAAGAAAGATTACAATTTGGCAAAGCACCCAGAAATCGATGTTCCTAATTTGCAGGTCATTAAGCTTATGCAGAGCTTCAAATCAAGGGAATATGTTAGGGAAACCTTTGCTTGGATGCACTATTACTGGTTTCTTACAAATGATGGAATTGAGTTTCTCAGAACTTATCTTAATCTTCCTTCTGAGATTGTCCCTGCTACTTTGAAGAAACAGGCTAAGCCACCTGGTAGACCATTTGGTGGTCCACCCGGTGATCGTCCTAGGGGTCCACCTAGGTTTGACGGAGAACGTAGATTTGGTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCTGGTGGTGAGTTTGGAGGAGATAAGGGAGGTGCTCCTGCTGATTACAGGCCCTCGTTTGGGGGTCCTGGTGGAAGGTCTGGCTTTGGTCGTGGGTCTGGTGGTTTTGGGGCTCCAACCAGCTCAGATGCTTAA 540 0.4759 MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRSGFGRGSGGFGAPTSSDA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00428 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
Tsu02g00428 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 174 IPR037447 -
Tsu02g00428 179 Gene3D - 1 104 IPR036388 -
Tsu02g00428 179 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 174 - -
Tsu02g00428 179 MobiDBLite consensus disorder prediction 112 128 - -
Tsu02g00428 179 MobiDBLite consensus disorder prediction 91 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00428 Tsu-Chr2 3589013 3591016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00428 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 80.645 1.32e-73 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00428 K02947 - gmx:100500445 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00428 02 3589013 3591016 Tsu02g00428 02 3589013 3591016 ECH
Tsu05g00256 05 1907500 1914123 Tsu02g00428 02 3589013 3591016 PCT